Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01964 ATGCAAGACGCAATTGGGATTCCAGCTTGCTTCTCTTCTGCTTTGAAATCAAGCGATGATCACACAACAACCGTGACGCGTTCAGGCCAGAGCGTGCACATGTCCGTGTACAGAACGAAGATTGCTGAGCAGTGCCGCTTGATCACCATCACATGGTGCAAAAACTTGATGCTCCATGGGCTCTCAGTGTCAGTGGAAGGCCCAGAAGGAGAGGCCCAATACTGCTGCAAGGTGGAGCTGAAACCATGGTACTTTTGGAGAAAACAAGGCTCCAAGCGCTTCATCGTATACGGCAACAAAGCCGTTGAGATCTTCTGGGACCTCAGGGCCGCGAAGTTCCACGGCGAGACAGAACCAACCTCGGAGTACTACGTTGCCGTGGTGTGTGACCAAGAGGTTGTGCTGCTGATCGGTGATTTGAAGAAAGAAGCTTACAGAAGAACTGGGTGCAGGCCAGCACTTATTGACCCAATTTTGGTTTCGAAGAAAGAACACATATTTGGGAAGAGAAAGTTCTCAACCAGAGCCAAGTTTCACGAGAAGGGTAGGTGCCATGAGATCTCAATAGAGTGCAAGAACAAGAGCAATAACAATACTGGAGGAGATTCTTCAAGTGGGGTCCAGGTTCAGGTTCAGGTTCAGCCAGAGATGGAGATAAGATTCGATGGGCACGTGGTGATCCACGTGAAGCACTTGCAATGGAAGTTCAGAGGGAACGAGTCGATTCATCTCAACAAGATGAGAGTGGAGGTGTATTGGGATGTTCACGATTGGCTCTTTAGTCCTGGTTTGAAACATGCTTTGTTTATTTTTAAGCCTGTTTTATCAACAATATCTATGTCATCATCGCATTCAATTTCATCATCTTCACCACCGTTATCTTTATCGTCCACATCCACGCCGTTATCGACTCAAACGGGGAGTTCTGGGTCGCTAGAGGGGTTTAGTGTTAACGAGTCATCGGAGTTTTGTTTGTTTCTCTATGCTTGGAAGGTTGAGTAG 1002 0.4741 MQDAIGIPACFSSALKSSDDHTTTVTRSGQSVHMSVYRTKIAEQCRLITITWCKNLMLHGLSVSVEGPEGEAQYCCKVELKPWYFWRKQGSKRFIVYGNKAVEIFWDLRAAKFHGETEPTSEYYVAVVCDQEVVLLIGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKRKFSTRAKFHEKGRCHEISIECKNKSNNNTGGDSSSGVQVQVQVQPEMEIRFDGHVVIHVKHLQWKFRGNESIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPVLSTISMSSSHSISSSSPPLSLSSTSTPLSTQTGSSGSLEGFSVNESSEFCLFLYAWKVE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01964 333 PANTHER EXPRESSED PROTEIN 7 331 IPR008586 -
Pumo10g01964 333 MobiDBLite consensus disorder prediction 286 305 - -
Pumo10g01964 333 Pfam Plant protein of unknown function (DUF868) 28 331 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01964 Pumo-Chr10 25908454 25910364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01964 7 333 EF-hand Containing Proteins AT5G28150 36.364 1.18e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01964 - - gmx:100816323 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01964 10 25908454 25910364 Pumo10g01964 10 25908454 25910364 ECH
Pumo4g01466 4 18553873 18555661 Pumo10g01964 10 25908454 25910364 PCT