Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01443 ATGGCAAAGCTTGCAGTTCCACCTTTGTTTTCTCAAAGGCACATCCTGGTCCTGTCACTTGCTCTGAATGTGAGTTTGATTCTGAGGACTGTGTATTATGAAAGTGAAGAAGGGAGCAAGGGGTTTTGTTTGAAGAAAAAAATGATGGCAGATGCGGATTCTGATAGAGAGGGGCATCTTATCCACAAATCACGTTTGGCTATATCCTCTACTTCGTCTCTCGTTAATTCTACTCGTGCAGATCGTCCAGGAGGAAGGGAAACAGTGATCAACTTGGATCATGGAGACCCAACAATGTATGAAAGATTTTGGAGACAAATGGGTGACAAGACCACAATCATAATTCCAGGATGGCAATCCTTGAGTTATTTATCTGATGTCTCAAACATTTGCTGGTTCCTGGAAGCCGAGTTTGCAAAGGAAGTAGTGAGGTTGCACAAAGTGGTGGGCAATGCTGTGACAGAAGGTCGCCATATTGTTGTTGGGACAGGTTCCTCTCAGCTAATTCTCGCTGCCCTTTATGCTCTGTCCTCGCCTGATGCTGCTGAACCAATCAGCGTGGTATCTGCCGCACCCTATTATTCGTCTTACCCATCAATGGCAGATTACCAGAAATCAGGCCTTTACAAATGGGCTGGTGATGCAGAGAATTTTGACAAAGAGTGTCCTTATATTGAGCTGGTTACTTCTCCCAATAACCCAGATGGATATAGAAGGCAGGCAATGGTGAACCGAAGCCAGGGACTATTGATTCATGACCTTGCCTATTATTGGCCGCAATACACTCCAATATCATCCCCTTCGGATCATGATCTCACTCTTTTCACTGTCTCAAAAAGCACTGGTCATGCAGGAATGCGCATAGGGTGGGCTCTTGTGAAAGATAAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTAAATACAATCGGTGTCTCAAAGGATTCTCAACTCAGAGCTGCCAAGGTAATAAAGGCAGTGTCTGACAGCTGCGAACAAGAAAACTCCCAAAATGGGGAATCATTTTTCAGGTACAGCTACAATCTCATGGCACAACGGTGGAAGCAACTGAGAGCAGTAGTTGAGGCCGGTGATTTGTTCACTTTGCCTCAATTTTCTCCTGCATTCTGCACCTTCTTTGGTCAGGAGACGGAGCCTCAACCAGCTTTCATATGGTTGAAGTGTGAGGGAGATATAGAGGACTGCGAAGGCTTGCTTCGAGAACACAAAATTATAGCAAGAAGTGGGAGACACTTTGGGGCTAGCCCAAAATACGTAAGAATTAGCATGCTCGATACAGATGAAACTTTTATACAGTTAATAGATAGACTATCAGCCATACAACAAGGAGAATGA 1359 0.4422 MAKLAVPPLFSQRHILVLSLALNVSLILRTVYYESEEGSKGFCLKKKMMADADSDREGHLIHKSRLAISSTSSLVNSTRADRPGGRETVINLDHGDPTMYERFWRQMGDKTTIIIPGWQSLSYLSDVSNICWFLEAEFAKEVVRLHKVVGNAVTEGRHIVVGTGSSQLILAALYALSSPDAAEPISVVSAAPYYSSYPSMADYQKSGLYKWAGDAENFDKECPYIELVTSPNNPDGYRRQAMVNRSQGLLIHDLAYYWPQYTPISSPSDHDLTLFTVSKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVIKAVSDSCEQENSQNGESFFRYSYNLMAQRWKQLRAVVEAGDLFTLPQFSPAFCTFFGQETEPQPAFIWLKCEGDIEDCEGLLREHKIIARSGRHFGASPKYVRISMLDTDETFIQLIDRLSAIQQGE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01443 452 CDD AAT_like 137 445 - -
Pumo4g01443 452 Gene3D - 134 338 IPR015421 GO:0003824
Pumo4g01443 452 Gene3D - 82 130 IPR037029 GO:0016846
Pumo4g01443 452 Pfam Allinase 90 448 IPR006948 GO:0016846
Pumo4g01443 452 SUPERFAMILY PLP-dependent transferases 87 446 IPR015424 -
Pumo4g01443 452 Gene3D Aspartate Aminotransferase, domain 1 341 449 IPR015422 GO:0003824
Pumo4g01443 452 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 95 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01443 Pumo-Chr4 18303205 18311240 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01443 K16903 - gmx:100777098 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01443 4 18303205 18311240 Pumo4g01443 4 18303205 18311240 ECH
Pumo4g01443 4 18303205 18311240 Pumo10g01993 10 26297414 26305737 PCT