Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01993 ATGGCTAAGCCTAAGCTTCATACCATGTTCTCTTTGAGGCACTTCTTGGCACTCTCCCTCGCCTTGAACGTGAGCCTGATACTGAGATTAATGATGCACGAACCTCACAATCATTCTTCTTTGGAAACAGCAGAAAGAGGGACCTCGATTAATGCAAGAACCAATTCTAACACGGAGGATCAGCATCATATCCACAAATCACGCATGGTTATATCGTCCTCCACTTCGTCTTTCGCCAATTCTACTTGCACAGCAGAAGGCACCAATAGAGTGATCAACCTCGACCATGGAGACCCGAGAGTGTATGAGAGGTTTTGGCGACAAACGGGTGACAAGAGCACGATTGTAATCCTGGGATGGCAGAGTATGAGTTATTTTTCTGATGTGAGCAACATTTGCTGGTTTTTGGAGGCAGAGTTTGCTAGGGAAGTGGTGAGGCTGCACAAAGTGGTGGGCAATGCAGTCACAGAAGGGCGTCACATTGTTGTTGGAACAGGTTCTTCTCAGCTCTTTCTGGCTGCTCTCTATGCTCTCTCCCCAACTGATGCACCTGAACCAATCAGTGTTGTCTGTGCCTCACCCTACTACTCGTCGTACCCATCAATGACGGATCACCTGAAATCAGGGCTTTACAAATGGGGTGGTGATGCAGAAAGTTATGAGAAAGAGGGTCCCTACATTGAGCTGGTTACTTCTCCCAATAATCCTGATGGACACGTAAGAAGATCTAAAATCAACAGAAGCCAGGGATTTTTGGTCCATGACCTTGCCTATTACTGGCCACAGTACACTCCAATATCAGCGCCTGCAGACCACGATCTCACGCTTTTCACTGTTTCAAAAAGCACTGGCCATGCAGGAATGCGCATAGGGTGGGCTCTTGTGAAAGATCAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTGAATACAATTGGAGTGTCCAAGGATTCTCAACTCAGGGCTGCTAAGGTTTTAAGGGCAGTTTCTGATAGCTGGGAACATGGAAACTCCCAAGAGGGTGAGTCATTCTTCAAATTCAGCCACAAACTCATGGCCAACAGGTGGAAGCAACTGAGACTAGTGGTGGAGCGTAGCAAAATTTTCAGTTTGCCCAAATTTTCTCCATCATTCTGCACCTTTTTCAATCAGGTCTTGGAGCCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAACATGGAAGACTGCGAAAGCTTCCTTCGAGGACACAACATCTTAACGAGAAGTGGAACACACTTTGGGGTTAGCCCAAAATACGTAAGAATTAGCATGTTGGATACTGACGAAAATTTTAACCACTTTCTAGATAGACTCTGTGCCATACAGTCACGATAG 1362 0.4581 MAKPKLHTMFSLRHFLALSLALNVSLILRLMMHEPHNHSSLETAERGTSINARTNSNTEDQHHIHKSRMVISSSTSSFANSTCTAEGTNRVINLDHGDPRVYERFWRQTGDKSTIVILGWQSMSYFSDVSNICWFLEAEFAREVVRLHKVVGNAVTEGRHIVVGTGSSQLFLAALYALSPTDAPEPISVVCASPYYSSYPSMTDHLKSGLYKWGGDAESYEKEGPYIELVTSPNNPDGHVRRSKINRSQGFLVHDLAYYWPQYTPISAPADHDLTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWEHGNSQEGESFFKFSHKLMANRWKQLRLVVERSKIFSLPKFSPSFCTFFNQVLEPQPAFVWLKCEGNMEDCESFLRGHNILTRSGTHFGVSPKYVRISMLDTDENFNHFLDRLCAIQSR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01993 453 CDD AAT_like 139 447 - -
Pumo10g01993 453 Gene3D Aspartate Aminotransferase, domain 1 336 453 IPR015422 GO:0003824
Pumo10g01993 453 SUPERFAMILY PLP-dependent transferases 85 449 IPR015424 -
Pumo10g01993 453 MobiDBLite consensus disorder prediction 42 57 - -
Pumo10g01993 453 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 54 448 - -
Pumo10g01993 453 Gene3D - 136 335 IPR015421 GO:0003824
Pumo10g01993 453 MobiDBLite consensus disorder prediction 39 66 - -
Pumo10g01993 453 Gene3D - 38 132 IPR037029 GO:0016846
Pumo10g01993 453 Pfam Allinase 92 449 IPR006948 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01993 Pumo-Chr10 26297414 26305737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01993 K16903 - gmx:100807013 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01993 10 26297414 26305737 Pumo10g01993 10 26297414 26305737 ECH
Pumo4g01443 4 18303205 18311240 Pumo10g01993 10 26297414 26305737 PCT