Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01417 ATGCTGAGAGTGGGCGCAAAGAGGGTTTTGAAAACGACGTCGTTCGGCGTTAGGGTTCCGGCGCGGTTGTACCACGAGAGGGTTGTGGATCACTACAACAATCCGCGGAACGTTGGGTCGTTCGACAAGAACGACCCGAGCGTGGGGACGGGTTTGGTGGGGGCGCCGGCGTGCGGCGATGTGATGAAGCTCCAGATTAAGGTCGACGACAGAACCGGAAAAATCGTCGATGCTCGATTCAAAACTTTCGGCTGTGGCTCCGCCATTGCTTCTTCCTCCGTCGCTACTGAGTGGGTGAAGGGAAAGCAAATGGAGGAAGTTCTGTCCATAAAAAATACTGAAATTGCAAAGCATCTATCACTTCCACCAGTTAAGCTCCACTGCAGCATGCTTGCTGAAGATGCAATTAAAGCTGCCGTTAAGGACTATGAAGCTAAGCGTTTTAAGGCAACTGCTAGCGGAGAGGCAGCAACAGGAGAGAAGCCTGCCACTGCATGA 498 0.5261 MLRVGAKRVLKTTSFGVRVPARLYHERVVDHYNNPRNVGSFDKNDPSVGTGLVGAPACGDVMKLQIKVDDRTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRFKATASGEAATGEKPATA 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01417 165 Pfam NifU-like N terminal domain 24 149 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pumo4g01417 165 NCBIfam Fe-S cluster assembly scaffold IscU 24 147 IPR011339 GO:0005506|GO:0016226|GO:0051536
Pumo4g01417 165 CDD IscU_like 23 139 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pumo4g01417 165 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 17 155 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pumo4g01417 165 Gene3D - 23 163 - -
Pumo4g01417 165 FunFam Iron-sulfur cluster assembly protein 24 163 - -
Pumo4g01417 165 SUPERFAMILY SufE/NifU 23 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01417 Pumo-Chr4 17960913 17962823 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01417 K22068 - gmx:100526856 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01417 4 17960913 17962823 Pumo10g02028 10 26945675 26948043 PCT