Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02028 ATGCTGAGAATCGCCGCAAGCGCAAAGAGACTTGTTCAAACGGCGTCGTTGGAGGCGCCACCGTTGGGGATTAGGGTTCTGCCGCGGCTCTACCACGAGAGGGTGGTGGACCACTACGACAACCCCCGCAATGTTGGATCCTTCGACAAGAACGACCCCACCGTCGGAACGGGTCTTGTTGGAGCACCCGCGTGTGGTGACGTCATGAAACTCCAAATTAAGGTTGACGACAAAACGGGGAAGATCGTCGATGCACGCTTCAAAACCTTCGGTTGTGGATCCGCCATTGCTTCTTCCTCCGTCGCTACTGAATGGGTGAAGGGAAAGCAAATGGAGGAAGTTTTGTCCATTAAAAACACTGAAATTGCAAAGCATCTTTCACTTCCACCAGTCAAGCTTCACTGCAGCATGCTTGCTGAGGATGCAATAAAAGCAGCTGTTAAAGATTATGAATCTAAGCGTGCCTCAGCATCTGCTGGTGGACAAGCAACTGCTTGA 498 0.5141 MLRIAASAKRLVQTASLEAPPLGIRVLPRLYHERVVDHYDNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYESKRASASAGGQATA 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02028 165 CDD IscU_like 30 146 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pumo10g02028 165 SUPERFAMILY SufE/NifU 30 154 - -
Pumo10g02028 165 FunFam Iron-sulfur cluster assembly scaffold protein IscU 29 157 - -
Pumo10g02028 165 Pfam NifU-like N terminal domain 31 155 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pumo10g02028 165 Gene3D - 30 163 - -
Pumo10g02028 165 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 8 159 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pumo10g02028 165 NCBIfam Fe-S cluster assembly scaffold IscU 31 154 IPR011339 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02028 Pumo-Chr10 26945675 26948043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02028 K22068 - gmx:100806169 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02028 10 26945675 26948043 Pumo10g02028 10 26945675 26948043 ECH
Pumo4g01417 4 17960913 17962823 Pumo10g02028 10 26945675 26948043 PCT