Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01413 ATGGCGCAAACAGGCAACAGTTCAATGCACCGGTCGAGTTCACGGCCTCAGCTGGATCTCAGCAAAGCAGAAATTCAAGGAAACGTCGAAGAGAAGTATCCAACTATTTTGTTACCCAATCAGTCTCATGACATATCTCATCTCGCTCTTGACATTGGAGGATCTCTTATAAAGTTGGTGTACTTTTCAAGACACCAAGACCAATCAACCTATGATAAAAGGATGAAAAATGTGAAGAATCGACTGGGATTTCCGCCCAATGGTAACAGGAGAAGCTATCCTATTCTTGGTGGAAGGCTTCATTTCGTGAAGTTTGAAACTAGCAAGATTAATGAGTGCCTAGACTTCATTTACTCAAAGCTGCTTCACTGTGGTGGAGGGGAATCACGTTTTTCTGATGCCACGACTGATTCAAATGCCATAATTAAGGCTACTGGTGGTGGAGCACACAAATTTGCTGACCTTTTCAAAGAAAGACTCGGACTTAGTCTTGACAAAGAAGATGAAATGAGCTGTCTTGTAGCAGGAGCAAATTTCTTGCTGAAGGCAATTCGTCATGAAGCTTTTACACACATGGAGGGCCAGAAAGAGTTTGTTCAAATTGACACTAATGATTTGTTTCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGAAAATTTGAGAGGGTCAGTGGGACTAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGGCTGTTAACAAAGTGTGAGAGCTTTGATGAGTTACTTGAGCTGAGTCAGAAAGGAGATAATAGAAATACTGACATGCTTGTTGGGGACATTTATGGTGGCATGGACTATTCTAAGATTGGCCTATCGGCTTCTACCATCGCTTCAAGTTTTGGCAAGGCTACCTCAGACAAAAAGGGACTTGAAGATTACAGACCTGAAGATATATCACTCTCTCTTCTCCGAATGATTTCATACAATATTGCCCAGATAGCCTACTTAAATGCATTGCGATTTGGATTGAAGCGTATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGATGCTATTTCTTTTGCAATTCATTTCTGGTCTAATGGGGCTGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTTGGAGCATTAGGTGCATTTATGAGTTATGAAAAACACGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGATTCCCAATGGGTGCTCCATATACAGGAGGCAAGATTCATGGCCCCCCACTTAGGGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTCTACAGAAGGGAACTGAGATCACTGCCCCTGTGCCGATGGCTCCTCCTGGAACTACTGGACTCGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCTAGTGCTCTAAATGTTGGTGTCCTACATCTAGTACCCACTTTAGAGGTGTTTCCATTATTAGCAGACCTGAAAATGTATGAGCCTAATACTATTGATCTCTCAGATCACAGTGAATTAGAGTATTGGTTCAAGATTTTGTCAGAGCACTTGCCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGGACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACCTGGCTAGGTTAATGGAGGAGCCTGCTGCATATGGGAAGTTGGGCCTGGCCAGACTACTGGAAATGAGGGAAGAGTGCTTGAGGGAATTCCATTTTTTTGATGCATATATAAGTATAAAGCAGAGGGAAAATGAGGCATCGCTTGCTGTGTTACCTGATTTGTTGATGGAGCTTGATAGTCTGGATGAGGAAACAAGACTGCTTACTCTAATTGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCAAAGACCTTGGCGAGTGGATGATTTTGATGCCTTTAAAGAGAGAATGTTAGGAACTGGGGACAAGAAACCACCCCCACATAAAAGAGCTTTGCTTTTTGTGGACAATTCAGGTGCTGACATTGTTCTAGGGATGCTTCCCCTGGCACGAGAGCTCCTCCGTCATGGAACTGAAGTTGTCCTGGTTGCAAATTCCCTTCCTGCTTTGAATGATGTGACTGCAATGGAGCTTCCTGACATTGTTGCTGAGGCTGCCAAGCACTGTGACATTCTTAGGCGAGCTGCTGAATCTGGTGGCTTGCTTGTTGATGCAATGACTAATACCTTGGACAGTCCTAGAGAAAATTCATCTTCTGTTCCCTTGATGGTTGTTGAGAATGGGTGTGGTAGTCCATGTATAGACTTGAGACAGGTCAGCTCTGAGCTGGCTGCTGCTGCAAAAGATGCTGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTCAATGCCCGGTTTCAGTGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCAGAGATTGGCTGAAAAGTTGATTAAAGGGAACATATACGACTGTATTTGCAAATACGAGCCTGCTAACTGA 2607 0.4296 MAQTGNSSMHRSSSRPQLDLSKAEIQGNVEEKYPTILLPNQSHDISHLALDIGGSLIKLVYFSRHQDQSTYDKRMKNVKNRLGFPPNGNRRSYPILGGRLHFVKFETSKINECLDFIYSKLLHCGGGESRFSDATTDSNAIIKATGGGAHKFADLFKERLGLSLDKEDEMSCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDTNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCESFDELLELSQKGDNRNTDMLVGDIYGGMDYSKIGLSASTIASSFGKATSDKKGLEDYRPEDISLSLLRMISYNIAQIAYLNALRFGLKRIFFGGFFIRGHAYTMDAISFAIHFWSNGAAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLRDLNEKISWMEKFLQKGTEITAPVPMAPPGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADLKMYEPNTIDLSDHSELEYWFKILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLARLLEMREECLREFHFFDAYISIKQRENEASLAVLPDLLMELDSLDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKERMLGTGDKKPPPHKRALLFVDNSGADIVLGMLPLARELLRHGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAESGGLLVDAMTNTLDSPRENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFQCDALKLAMVKNQRLAEKLIKGNIYDCICKYEPAN 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01413 868 Pfam Fumble 47 390 IPR004567 GO:0004594|GO:0005524|GO:0015937
Pumo4g01413 868 SUPERFAMILY Actin-like ATPase domain 159 392 IPR043129 -
Pumo4g01413 868 PIRSF PanK_long 1 868 IPR015844 GO:0004594|GO:0015937
Pumo4g01413 868 FunFam Pantothenate kinase 1 47 186 - -
Pumo4g01413 868 PANTHER PANTOTHENATE KINASE 17 758 IPR004567 GO:0004594|GO:0005524|GO:0015937
Pumo4g01413 868 FunFam Pantothenate kinase 2 504 590 - -
Pumo4g01413 868 SUPERFAMILY Actin-like ATPase domain 45 187 IPR043129 -
Pumo4g01413 868 SUPERFAMILY AF1104-like 483 866 IPR036075 -
Pumo4g01413 868 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 669 866 - -
Pumo4g01413 868 FunFam Pantothenate kinase 2 272 381 - -
Pumo4g01413 868 Gene3D - 505 589 IPR035073 -
Pumo4g01413 868 Gene3D - 271 381 - -
Pumo4g01413 868 Pfam Damage-control phosphatase ARMT1-like domain 575 854 IPR002791 -
Pumo4g01413 868 NCBIfam type II pantothenate kinase 47 391 IPR004567 GO:0004594|GO:0005524|GO:0015937
Pumo4g01413 868 Gene3D - 40 200 - -
Pumo4g01413 868 FunFam Pantothenate kinase 2 39 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01413 Pumo-Chr4 17936676 17947947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01413 K24265 K09680 gmx:100783082 1652.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01413 4 17936676 17947947 Pumo10g02029 10 26971912 26987289 ECH
Pumo4g01413 4 17936676 17947947 Pumo4g01413 4 17936676 17947947 ECH
Pumo4g01413 4 17936676 17947947 Pumo10g02029 10 26971912 26987289 PCT