Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02029 ATGGATGGTTCTGTACAAAACGAACAACAACAACTTCTTGGAATTATCGAAGAACAAAAATTGCAGAAACACAAACAAGAGTGTGAGGGGAACAACAACGACAATAACAACAACACGCGCACGCAATTGGAGAGTGAGATGGCTCATACGGCAGGCAATTCGATCCACAGGTCGGGTTCGAGGCCTCAACTTGATGTGAGCAAAGCTGAGATTCAAGGGAATGTGGAGGAGAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCATCTTGCTCTTGACATTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCAAGACATGAAGACCAATCAGCGGATGATAAAAGGAAGAAAAGTGTGAAGGAGCGACTGGGGCTTTCTAATGGTAACAGGAGAAGCTTCCCTATTCTTGGGGGAAGGCTTCACTTTGTGAAGTTTGAAACGAGAAAGATTAATGAGTGCTTGGATTTCATTCATTCAAAGCAGCTTCACTGTGGTGGGTTGGAGTCACGTTACTCTGATGGTGTGACTGACCAGAATGGCATAATTAAGGCTACTGGAGGTGGAGCATACAAGTATGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTGGCAGGAGCAAATTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCACAAAGAGTTTGTTCAAATTGAACCTAATGATTTATTCCCTTATCTTCTGGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGAAAATTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGTTGAGTCAAAAAGGAGATAATAGAACTATGGACATGCTAGTTGGAGACATTTACGGGGGTTTGGACTATTCTAAGATTGGCCTATCAGCTTCCACTATTGCTTCAAGTTTTGGCAAAACGATATCAGAAAAAAAGGAACTTGAAGAGTACAGACCTGAAGATATATCACTCTCTCTTCTACGGATGATTTCATACAATATTGGCCAGATAGCTTACTTGAATGCATTGCGATTTCGGTTGAAGCGAATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTACATTTCTGGTCTAATGGGGAAGCCCAAGCAATGTTCTTGCGACATGAAGGATTTCTAGGAGCTTTAGGTGCATTTATGAGTTATGAGAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTGGTGGAAAGGTTTCCAATGGGTGCTCCATATACAGGAGGCAAGATTCATGGCCCACCACTTGGAGATTTAAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCGAAAGGGAACTGAGATTACTGCACCTGTGCCAATGACTCCACTTGCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCAAGTGCTCTAAATGTCGGTGTTCTCCATCTAGTACCAACATTGGAGGTGTTTCCATTACTAGCAGACCCAAAATTGTATGAGCCCAATACAATTGATCTCTCAGATCACAGTGAATTAGAATATTGGCTCACAATTTTATCAGAGCACTTACCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCAGCCCACTTGGCAAGGTTGATGGAGGAGCCTTCTGCGTATGGGAAACTAGGCCTCGCCAATCTCTTGGAAATGAGGGAAGAGTGCTTGAGGGAATTCCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAGGCATCGCTTGCTGTTTTACCTGACTTGCTGGTGGAACTTGATAGTATGGATGAGGAATCAAGGCTGCTTACACTTATTGAAGGTGTTCTTGCGGCAAATATTTTTGACTGGGGATCTCGTGCATGTGTGGACCTCTATCATAAAGGAACTATTATTGAAATTTATAGAATGAGTCGCAATAAAATGCGTAGGCCTTGGCGGGTGGATGATTTTGACTACTTTAAAGAGAGAATGTTAGGGACCGGGGACAAGAAAATGCCCCGTCATAAGAGGGCTTTACTTTTTGTAGATAACTCAGGTGCTGACATTGTTCTAGGGATGCTTCCACTGGCTAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTTCTGGTTGCAAACTCACTTCCTGCTTTAAATGATGTCACTGCAATGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAAGCATTGTGACATTCTAAGGCGAGCTGCCGAAGCTGGAGGCTTGCTTGTGGATGCGATGGTTAATACTTCAGACAGTTCTAAAGAAAATTCATCTTCAGTTCCCTTGATGGTTGTTGAGAACGGGTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTAGCTGCTGCTGCAAAAGATGCCGATCTGATAATTTTGGAAGGGATGGGGAGAGCACTTCATACCAACCTCAATGCTCGGTTTAAGCGTGATGCTTTAAAGCTTGCAATGGTGAAGAACCAGAGATTGGCCGAAAAATTGGTTAAAGGGAACATATACGACTGTATTTGCAAATACGAGCCTGCTAGTTGA 2745 0.4306 MDGSVQNEQQQLLGIIEEQKLQKHKQECEGNNNDNNNNTRTQLESEMAHTAGNSIHRSGSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSADDKRKKSVKERLGLSNGNRRSFPILGGRLHFVKFETRKINECLDFIHSKQLHCGGLESRYSDGVTDQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGHKEFVQIEPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLRKGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKLYEPNTIDLSDHSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLVELDSMDEESRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDYFKERMLGTGDKKMPRHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMVNTSDSSKENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFKRDALKLAMVKNQRLAEKLVKGNIYDCICKYEPAS 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02029 914 PIRSF PanK_long 46 914 IPR015844 GO:0004594|GO:0015937
Pumo10g02029 914 Gene3D - 314 426 - -
Pumo10g02029 914 FunFam Pantothenate kinase 1 93 231 - -
Pumo10g02029 914 NCBIfam type II pantothenate kinase 93 436 IPR004567 GO:0004594|GO:0005524|GO:0015937
Pumo10g02029 914 SUPERFAMILY Actin-like ATPase domain 92 232 IPR043129 -
Pumo10g02029 914 Gene3D - 551 636 IPR035073 -
Pumo10g02029 914 PANTHER PANTOTHENATE KINASE 63 806 IPR004567 GO:0004594|GO:0005524|GO:0015937
Pumo10g02029 914 FunFam Pantothenate kinase 2 232 417 - -
Pumo10g02029 914 Pfam Fumble 93 435 IPR004567 GO:0004594|GO:0005524|GO:0015937
Pumo10g02029 914 SUPERFAMILY Actin-like ATPase domain 204 437 IPR043129 -
Pumo10g02029 914 FunFam Pantothenate kinase 2 85 245 - -
Pumo10g02029 914 Gene3D - 85 245 - -
Pumo10g02029 914 FunFam Pantothenate kinase 2 550 636 - -
Pumo10g02029 914 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 715 912 - -
Pumo10g02029 914 Pfam Damage-control phosphatase ARMT1-like domain 621 900 IPR002791 -
Pumo10g02029 914 SUPERFAMILY AF1104-like 530 912 IPR036075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02029 Pumo-Chr10 26971912 26987289 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02029 K24265 - gmx:100781580 1701.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01413 4 17936676 17947947 Pumo10g02029 10 26971912 26987289 ECH
Pumo10g02029 10 26971912 26987289 Pumo10g02029 10 26971912 26987289 ECH
Pumo4g01413 4 17936676 17947947 Pumo10g02029 10 26971912 26987289 PCT