Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01403 ATGAATTTAAAATTTTCAACAGAGTGGACAGTGGAGTCTTGTATCTCATACAGAACCCACACTTTATCCTCTCTGCACTCCAAGAATCAAAACCATAACAGGCCGTACGATAGATACACGTGGCGCGATCGCAAGGCCCTCCACGAAAACGCGAACCATATTCGAAGAATCGAACCCACGTGGCACGGTCCCACAAAAGAAAACCCGGAAGCCAAAAAATCCCTAGTCCCCACGGTTTCCTTTTCACTTTCTTTCCACTTTCCCACAACCCAAACACTCCTCTTCTTTATTCTTCATTCTTTCTACACTTTAAATTCCGCCACCACCACCACTTCCAACATCGCCGAGCCCTCTATGAAGAACTCATCTTCGAAAAACTCCGAGTCATCGACTCACTTCGACTCGCCTCACTCGCCTCTCCGCTACCGATCCTCCCCGCTCTCCGACAACGGCGACCCCTTCCACTCGCCGGAAAACTCGCCGGAAAATGACCACCGGGACAACTCCAGGGCCATCGTCATCGTCGAGACTTCGACTCAATTCGCCCAGGCCGCGCCCCCCGCGCCCGAGTCTGAGCACCGGAACCCGCCGCCGGACGCTCCGCCGGAGGTCGTCGTCACCCGCCCCGCGAGGCAGGAGCCGAGGTCGCCGGGCGCCGTTGGTCGGGCGCGGCCGAGGACGGTGGCGCCGCCCATCCGGGTGCCGCCGAAAAGACTCGTGATGGCGAAGAAGGTGGCGTTAGGGTTCCGGTTGAGCGAGGTGGTGCTGTGTCTGATTTCGTTTTCGGTTATGGCTGCGGACAAGACTCGTGGTTGGAGCGGTGACTCTTTTGATCGCTACAAGGAATACAGGTACTGTTTGTCTGTGAATGTTATTGCATTTGTATACGCAGCGTTTCAAGCGTGTGATCTGGCATATCAAGTAGTATCGGGGAGAAGCATAATCAATCACCACCTGCGTTACCACTTTGATTTCTTCATGGATCAGGTTCTGTCGTATCTTCTGATATCGGCTGCATCATCTGCTGCCACACGTGTTGATGACTGGCAATCGAATTGGGGAAAAGACGAGTTCACTGAGATGGCTAGTGCTTCAATTGCGTTGGCCTTTCTTGCTTTTGTTTCCTTTGCTATTAGCTCGTTAATCTCTGGCTACAACCTCTGCACTCTGTTCTCATAA 1179 0.531 MNLKFSTEWTVESCISYRTHTLSSLHSKNQNHNRPYDRYTWRDRKALHENANHIRRIEPTWHGPTKENPEAKKSLVPTVSFSLSFHFPTTQTLLFFILHSFYTLNSATTTTSNIAEPSMKNSSSKNSESSTHFDSPHSPLRYRSSPLSDNGDPFHSPENSPENDHRDNSRAIVIVETSTQFAQAAPPAPESEHRNPPPDAPPEVVVTRPARQEPRSPGAVGRARPRTVAPPIRVPPKRLVMAKKVALGFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVYAAFQACDLAYQVVSGRSIINHHLRYHFDFFMDQVLSYLLISAASSAATRVDDWQSNWGKDEFTEMASASIALAFLAFVSFAISSLISGYNLCTLFS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01403 392 PANTHER CASP-LIKE PROTEIN 4A4 217 388 - -
Pumo4g01403 392 MobiDBLite consensus disorder prediction 113 167 - -
Pumo4g01403 392 MobiDBLite consensus disorder prediction 190 204 - -
Pumo4g01403 392 MobiDBLite consensus disorder prediction 113 157 - -
Pumo4g01403 392 MobiDBLite consensus disorder prediction 180 228 - -
Pumo4g01403 392 Pfam Casparian strip membrane protein domain 243 374 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01403 Pumo-Chr4 17814480 17817085 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01403 - - gmx:100812568 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01403 4 17814480 17817085 Pumo10g02045 10 27474572 27477176 ECH
Pumo4g01403 4 17814480 17817085 Pumo4g01403 4 17814480 17817085 ECH
Pumo4g01403 4 17814480 17817085 Pumo10g02045 10 27474572 27477176 PCT