Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02045 ATGAACAAATCGCAGTCGAAGAACTCCGAGCCCTCGACACAGTTCGACTCGCCGCTCCGCTTCCACTCTCCGATGCACTGGGACGGCACCGAATCGCCGGAGTACCGCTCGCCGGAAAACTCGCCGGAAAAGCGCGACAACTCCATGGCCATCGTCACCGTCGGCAAGCTCAAGCAGTTCACGCCGGAGAAGCGCGCCGAGCACCGGAAGCCGCCAGAAAATCCGCGGCCGCCGGCGGTGATGGTGTTCAACGGCTCGGCGTCGGAGGACGCTCAGAGGCCGGCGGCGAAGGCGGCTCCGGTGTCCGGCGTCGGCGAACGGAGATCGAGGTCGGCGGCGGCGGCGGAGGGGTGGAAGACGGAGGAGACGGTGAGCAAGGCGGCGCTAGGGTTCCGGCTGACCGAGGTCGTGGTTTGTCTGATTTCGTTTTCTGTTATGGCCGCCGATAAGACGCAAGGTTGGAGTGGCGATTCCTTTGATCGCTATAAAGAATATAGGTATTGTTTATCTGTGAATATTATTGGGTTTGCATACTCTGCATTACAAGCATGTGATCTGACATGTCAACTTGCCACGGGGAAACGCTTAATCAGTCACCACCTTCGCAACCACTTTGATTTCTTCATGGATCAGGTTCTGGCGTATCTTCTGATATCGGCATCATCATCTGCAGCGACACGGGTTGACGATTGGATATTGAATTGGGGGAAAGACGAGTTCACAGAAATGGCCACTGCTTCAATTGGAATGGCCTTCCTCGCTTTTGTTGCCTTTGCCATCAGCTCACTCATCTCTGGTTACACCCTATGCAACCGAAGCTCGATGTGA 828 0.5616 MNKSQSKNSEPSTQFDSPLRFHSPMHWDGTESPEYRSPENSPEKRDNSMAIVTVGKLKQFTPEKRAEHRKPPENPRPPAVMVFNGSASEDAQRPAAKAAPVSGVGERRSRSAAAAEGWKTEETVSKAALGFRLTEVVVCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNIIGFAYSALQACDLTCQLATGKRLISHHLRNHFDFFMDQVLAYLLISASSSAATRVDDWILNWGKDEFTEMATASIGMAFLAFVAFAISSLISGYTLCNRSSM 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02045 275 PANTHER CASP-LIKE PROTEIN 4A4 98 270 - -
Pumo10g02045 275 MobiDBLite consensus disorder prediction 1 117 - -
Pumo10g02045 275 MobiDBLite consensus disorder prediction 27 43 - -
Pumo10g02045 275 Pfam Casparian strip membrane protein domain 123 257 IPR006702 -
Pumo10g02045 275 MobiDBLite consensus disorder prediction 60 74 - -
Pumo10g02045 275 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02045 Pumo-Chr10 27474572 27477176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02045 - - gmx:100789870 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01403 4 17814480 17817085 Pumo10g02045 10 27474572 27477176 ECH
Pumo10g02045 10 27474572 27477176 Pumo10g02045 10 27474572 27477176 ECH
Pumo4g01403 4 17814480 17817085 Pumo10g02045 10 27474572 27477176 PCT