Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01378 ATGGCAGGAGGTGGTGGAGCTCCAGCACCTAAGATTGATGAGCCACAGCCACACCCACCGAAGGATCAGCTTCCGAATGTTTCTTATTGCATTACCAGTCCTCCTCCATGGCCTGAGGCCATACTACTTGGTTTTCAACATTATCTTGTGATGCTCGGTACAACTGTGCTAATTCCCACTGCCCTTGTTCCCCAAATGGGAGGTGGCAATGAGGAGAAGGCAAAAGTTATCCAAACTCTACTCTTTGTAGCTGGAATTAACACATTGCTGCAAACTCTGTTTGGAACTCGATTGCCTGCAGTAATTGGAGGGTCTTATACTTACGTTGCAACAACAATCTCTATTATTCTTTCTGGTCGATTCAGTGATGAGCCAGATCCTATAGAGAAATTCAAGAGGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGCCTTTGGCGTAATGTTGCAAGGTTCTTGAGTCCACTTTCAGCAGTTCCCTTGGTATCTCTTGTTGGTTTTGGGCTTTACGAGTTAGGCTTTCCTGGGGTTGCTAAATGTGTAGAGATTGGACTGCCAGAGCTTATATTGCTAATATTTGTTTCACAGTTTGTACCCCATGTGCTACATGCAGGAAAACATGTCTTCGATCGGTTTGCTGTTTTATTTACAGTTGCAATTGTGTGGTTATATGCTTATCTGCTCACTGTTGGAGGGGCATACAATCATGCTGCACCTAAAACACAGTCAACCTGTCGCACTGATCGTGCTGGTTTAATAGAATCTGCCCCATGGATACGAGTTCCATATCCATTTCAATGGGGAGCACCTACATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTTATTGCTGTCTATCGGTATGCAAGTGCAACACCATTACCACCATCTATTCTTAGTCGCGGCATCGGTTGGCAGGGAGTTGCCATTCTGTTATCAGGATTGTTTGGAACTGGCAATGGATCCTCTGTATCTGTAGAAAACGCTGGTCTTTTGGCTTTAACTCGTGTTGGCAGTCGACGTGTGGTGCAAATATCGGCCAGTTTTATGATTTTCTTTTCAATTCTCGGGAAATTTGGAGCCGTTTTTGCATCCATTCCACCTCCCATTGTTGCTGCACTGTACTGCTTGTTCTTTGCTTATGTTGGAGCGGGAGGCCTAAGTTTTCTTCAATTCTGCAACCTCAACAGTTTTAGAACAAAGTTTGTATTAGGCTTCTCCATCTTCATGGGCTTGTCTGTGTCACAGTACTTCAATGAGTACACAGCAATTAATGGTTATGGTCCAGTTCACACCAAAGCAAGATGGTTCAATGACATAATCAATGTCCCGTTCCAATCAAAAGCATTTGTTGCGGGTTGTGTGGCATATTTCTTGGACAACACACTACATAAGAAGGAAGGTTCTATTCGGAAAGATAGAGGAAAACATTGGTGGGACAAGTACCGTTCCTTCAAGACTGACACAAGAAGTGAAGAGTTTTATTCACTGCCTTTCAAACTAAACAAATACTTCCCATCTGTGTAA 1602 0.4363 MAGGGGAPAPKIDEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTYVATTISIILSGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLIFVSQFVPHVLHAGKHVFDRFAVLFTVAIVWLYAYLLTVGGAYNHAAPKTQSTCRTDRAGLIESAPWIRVPYPFQWGAPTFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVAILLSGLFGTGNGSSVSVENAGLLALTRVGSRRVVQISASFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFVLGFSIFMGLSVSQYFNEYTAINGYGPVHTKARWFNDIINVPFQSKAFVAGCVAYFLDNTLHKKEGSIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFKLNKYFPSV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01378 533 NCBIfam purine/pyrimidine permease 41 440 - -
Pumo4g01378 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 531 - -
Pumo4g01378 533 MobiDBLite consensus disorder prediction 1 27 - -
Pumo4g01378 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01378 Pumo-Chr4 17462582 17472194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01378 9 533 Organic Solute Cotransporters AT5G49990 81.559 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01378 - - gmx:100791553 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01378 4 17462582 17472194 Pumo10g02071 10 27881618 27887439 PCT