Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02071 ATGGCAGGAGGAGGAGCTCCAGCAGCTAAAGCAGATGAGCCACAGCCACATCCACCAAAGGATCAGTTACCAAATATTTCTTACTGCATTACTAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTTTCTTGTGATGCTCGGCACAACTGTGTTGATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAACGATGAGAAGGCAAGAGTTATCGAAACCCTGCTTTTTGTAGCTGGTATTAACACATTGTTGCAAACAATGTTTGGAACTCGACTGCCTGCAGTAATTGGAGGGTCTTACACCTTTGTTCCAACCACAATCTCAATTATCCTTGCTGGCCGATTCAGTGATGAAGCAGATCCTATAGAGAAATTCAAGAGGATAATGAGGTCAATCCAAGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTGGGCTTCAGTGGTCTCTGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAGTTAGGGTTCCCTGGGGTTGCTAAATGTATAGAGATTGGACTGCCTCAGCTTATATTGCTAGTATTTGTTTCACAGTATGTGCCCCATGTGTTACATTCAGCGAAACATATCTTCGACCGTTTTGCTGTGTTATTTACAATTGTAATTGTGTGGATATATGCTCATCTACTTACTGTTGGAGGGGCCTATAATGATGCTCCACATAAAACTCAGACATCATGCCGCACTGATCGTGCCGGACTTATTGATGCTGCTCCTTGGATAAGAATTCCATATCCTTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCAGCTTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTATATAGGTATGCAAGTGCAACACCATTACCACCATCTATTCTCAGTCGGGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTATTTGGAACAGTCAATGGATCCTCTGTGTCCGTAGAAAATGCAGGTCTTTTGGCTTTGACACGTGTTGGAAGTAGACGAGTGGTGCAAATCTCCGCTGGATTTATGATTTTCTTTTCAATTCTTGGAAAATTTGGAGCAGTTTTTGCCTCCATCCCACCTCCCATAATTGCTGCCCTGTACTGCTTGTTCTTTGCTTTTGTTGGTGCTGGTGGTCTTAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTTAGAACAAAGTTCATTTTAGGCTTCTCAATCTTCATGGGCTTGTCTGTGCCACAGTACTTCAACGAGTACACAGCAATTAATGGTTATGGTCCAGTTCACACAGGCTCAAGATGGTTCAATGATATAATCAACGTTCCATTCCAATCCAAACCATTTGTTGCGGGTGTTGTGGCATATTTTCTAGACAACACTCTATTTAAGAGAGAAGCTGGTATTAGGAAGGACAGAGGAAAACATTGGTGGGACAAGTACAGGTCCTTCAAGGGTGACACAAGAAGTGAAGAGTTCTATTCACTGCCTTTCAATCTAAACAAGTACTTCCCCTCTGTTTAA 1599 0.4328 MAGGGAPAAKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNDEKARVIETLLFVAGINTLLQTMFGTRLPAVIGGSYTFVPTTISIILAGRFSDEADPIEKFKRIMRSIQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCIEIGLPQLILLVFVSQYVPHVLHSAKHIFDRFAVLFTIVIVWIYAHLLTVGGAYNDAPHKTQTSCRTDRAGLIDAAPWIRIPYPFQWGAPSFDAGEAFAMMMAAFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTVNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIIAALYCLFFAFVGAGGLSFLQFCNLNSFRTKFILGFSIFMGLSVPQYFNEYTAINGYGPVHTGSRWFNDIINVPFQSKPFVAGVVAYFLDNTLFKREAGIRKDRGKHWWDKYRSFKGDTRSEEFYSLPFNLNKYFPSV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02071 532 NCBIfam purine/pyrimidine permease 40 438 - -
Pumo10g02071 532 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 8 530 - -
Pumo10g02071 532 Pfam Permease family 38 442 IPR006043 GO:0016020|GO:0022857|GO:0055085
Pumo10g02071 532 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02071 Pumo-Chr10 27881618 27887439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02071 6 532 Organic Solute Cotransporters AT1G60030 76.850 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02071 - - gmx:100812585 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02071 10 27881618 27887439 Pumo10g02071 10 27881618 27887439 ECH
Pumo4g01378 4 17462582 17472194 Pumo10g02071 10 27881618 27887439 PCT