Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01356 ATGTCGTCGTCACCGCAGAGCATAAAGCAGAGAGTCTTCACATGCCTGACCAAACTCTCCGACCGCGATACGCAGTCCCTCGCCGCCGCGGAACTCGAGTCCATCGCTCGAAACCTCGACGGAGCCACCGTGCCGGCTTTCCTCTCGTGCATGTACTCCACCGACGCCTCCGACAAGCCACCGGTGCGCAAGCAATGCGTGCAGCTCCTAGGGTTCCTCGCGGAGACGCACGGCAACATGCTCGCGCCGTACTTGTCGAAGATCCTCGGCAGCGTCTTGCGGCGGCTCCGCGACGCGGACTCGTCGGTGCGATCCGCGTGCGTGAATTCGGTTGCGGCATTATCGCGCCACGTCAGCAAGCAGCCGTTGAATTCGTTTCTGAAGCCGTTGGCGGAGGCGCTGTTCACGGAGCAGGACCAGAACGCGCAGGCCGGCGCGGCGCTGTGTCTCGCCTCCGCGATCGACGGAGCTCCGGATCCGGACCCGGCCAGGCTGGCGAAGCTCCTGCCGAGGTTCGAGAAGCTTCTGAAGCGCGACGGGTTCAAGGCAAAGCCCGCGCTGTTGGCGCTTGTCGGAAGCGTCGTGGCCGCCGGCGGCGCGTCCGGCCACGCGCCGCTGAGGAGTTTGGTTCCGTGCTTGGTGGAGGCGTTGAGCAGCGACGATTGGGCCACGCGCAAGGCCGCAGCGGAGACGCTCGTGGTGGTTGCTGACGTGGAGAGGGATCTCTTGTCGGAGTTCAAGGCTGAGTGTGTGAGAGTTTTTGAGAATCGACGGTTTGATAAGGTGAAGTTAGTTCGGGACGTTATGAATCAGATGTTGGAAGCGTGGAAGCATATTCCTGATGTATCGGATGAAGTTTCGCCACCTCCTAAATCGCAATCTTCATCCAAAGAGAATGCAAGTGATGGGCGCTATCCCCAAGTCTCTCAAAATTCATGTAGTCCTCGTTCAATGATGGCCAATTTGCGGAGGAAATCTACTCCTTTTAGCAGATTCAGTCCAGCAGATAGTTCTTCTGCTAGCAATGCTAAGAATACGAGTGCTTCAAGTAGTAACAAGAGAATGAATTCGCTTGTTTCCCGAAAATTAAACCATAAGAATTCGGATGCTCAAATTGCCGTGGCTGATCAGGGAGATCTTCAGGAGAGGGATGGAATTGTTTTGGATAGGACCAAAATGGATAAAAGCAGATCTTCAAAGCCAGAAATGAAACGGGCGCTGCTAAATAAAAGTTCTGAGGATAAAATACAAAAGTATGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCATATCATGAAGAGAGTCAAGACTCAGTTCCTGTTGGTATTGTCTCTAAAGATCTCCATAGGAATGACAAAGAGAGTGAAGATTTATCACTTATCCGTGATCAGTTACATCAGATTGAGAAGCAGCAGTCAAGTCTACTTGATCTTCTGCAGGTTTGTTCTTAA 1452 0.5372 MSSSPQSIKQRVFTCLTKLSDRDTQSLAAAELESIARNLDGATVPAFLSCMYSTDASDKPPVRKQCVQLLGFLAETHGNMLAPYLSKILGSVLRRLRDADSSVRSACVNSVAALSRHVSKQPLNSFLKPLAEALFTEQDQNAQAGAALCLASAIDGAPDPDPARLAKLLPRFEKLLKRDGFKAKPALLALVGSVVAAGGASGHAPLRSLVPCLVEALSSDDWATRKAAAETLVVVADVERDLLSEFKAECVRVFENRRFDKVKLVRDVMNQMLEAWKHIPDVSDEVSPPPKSQSSSKENASDGRYPQVSQNSCSPRSMMANLRRKSTPFSRFSPADSSSASNAKNTSASSSNKRMNSLVSRKLNHKNSDAQIAVADQGDLQERDGIVLDRTKMDKSRSSKPEMKRALLNKSSEDKIQKYGGSKAGSRVVPYHEESQDSVPVGIVSKDLHRNDKESEDLSLIRDQLHQIEKQQSSLLDLLQVCS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01356 483 Coils Coil 451 471 - -
Pumo4g01356 483 Pfam HEAT repeat 209 237 IPR000357 GO:0005515
Pumo4g01356 483 Gene3D - 3 375 IPR011989 -
Pumo4g01356 483 ProSiteProfiles HEAT repeat profile. 88 126 IPR021133 -
Pumo4g01356 483 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 481 IPR033337 GO:0005874|GO:0008017
Pumo4g01356 483 FunFam TORTIFOLIA1-like protein 3 isoform A 1 357 - -
Pumo4g01356 483 MobiDBLite consensus disorder prediction 281 356 - -
Pumo4g01356 483 MobiDBLite consensus disorder prediction 287 356 - -
Pumo4g01356 483 MobiDBLite consensus disorder prediction 385 455 - -
Pumo4g01356 483 MobiDBLite consensus disorder prediction 385 412 - -
Pumo4g01356 483 SUPERFAMILY ARM repeat 8 266 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01356 Pumo-Chr4 17191485 17193769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01356 - - gmx:100789197 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01356 4 17191485 17193769 Pumo10g02097 10 28284325 28289235 PCT