Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02097 ATGCCTCACGCCGCAACGCAATCGCAGAACATAAAGCAGAGGGTACTCACGTGCCTCACGAAGCTCTCGGACCGCGACACTCAGGCCGCGGGAGCCACCGAGCTCGAGTCCATCGCGCGTGCCCTGGACCCGCACTCGGTTCCAGTGTTCCTCTCATGCATTCACTCCACCGACACTTCGGATAAAACACCGGTCCGCAAGCAATGCGTGCACCTCGTGGCCACGCTCTCCCACGCGCACGGCGATGCGCTCTCCCCTTTCCTTTCCAAAATCCTCGCCAGCCTCGTGCGCCGCCTCCGCGACCCGGACTCCTCCGTTCGGGCCGCCTGCGCCGACTCCTGCGCCGCGCTGTCGGCGCGCGTCACGCGGCAGCCGTTCTCGGCGTTCCTGAAGCCGCTGGCGGAGGCGCTGTTCACGGAGCAGGACTTGAACTCGCAGGGCGCCGCGGCGCTGTGTCTGGCCTCCGCGATCGACGGGGCTCCGGATCCGGACCCGGCCAGGCTCGCCAGGCTGCTCCCGAGGTTCGAGAGGCTCCTCAAGAGCAAGGTGTTTAGGGCCAAGCCAGCGCTGCTGGTGCTCGTTGGAAGCGTCGTCGAGGCTCGCGGCGCGGCGAGCCGCGCCGCGCTTAGGAATTTGGTTCCTTGCCTTGTGGAGGCGCTCGGCAGCGAGGACTGGGCCACCAGGAAGGGCGCCGCGGAGGCCTTGAAGAAACTCGCGAGCGTGGAGAGGGACAACTTGGCGGAGTTCAAGGCTGGATGCTTGAAAGTGTTTGAGAATCGGCGATTTGATAAGGTAAAGTTGGTTCGGGAGGTTATGAATCAGATGTTGGAGGCGTGGAAGCAGATTCCTGATGTTTCGGATGAATTTTCTCCACCTCCTCAATCGCAGTCGTCTTCAAAGGAGAATGCAAGTGATGGGCGCTATCCTCCTGTCTCTCAAAATTCATGTAGTCCGGGTTCTGTAATGAGTAAATTGAGGAAGAAATCGAGCCCAGTTAGCAAATCAACTCCGCCAGATAGATCTGCTGCTAGGAATGCTAAAAGGATGAGTTCAGGTGTTTTGCAGAAACTGAACCAGAACCAATGGGATGTTCAAATTGCTGTGTCAAATGTTCCTGATCGTGGTGAGCGTCAGCAGAAGGATGAAGATGTTTTGGAAAGAAGCAAAAAGGATAAAAGCAGATTTTTTAAGCCTGAAACAAAACGGGCTCTATTTGATAAAAATTCTGATGACAAGATGCATAAATTTGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCTTGTTCTGAAGAGAGTCAAGACTCAGGTCATGTCTGTAATGTAACTAAGGATCTCCATAGGAATGACAAAGAGAGTGAGGAATTATCTTTAATTCGTGCCCAATTAGTTCAAATTGAGAAGCAGCAGTCAAGTCTGCTTGATCTTCTACAGAAATTCATGGGGAGCTCTGAAAATGGAATGCGTACTTTAGAGACTCGTGTGCATGGCCTGGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTGTATCAAGTGGAAGGATAACTAAATCTGATGCTCCTAAGAATACTTGTTGCCTGCTACCTGGTGCTGAATTTTTAAGCTCCAAATTCTGGAAGAAAACACAGGGCCGGTATTCATCCTACCGGTTCTCTAGAACTGGTAGCACTCCATTACTAGCTTCCAGTCATTACAGAGCTAATAGGAATGCCGAATCTAATAGGTCGACAAGCCACAGATTTGGGGTCCATGGTGATGGAAACTTCATCACTAATCCTCTGGCAGAGATTAAAATTAATTCAAGGGAGATTTCAGGCTCTACAAGATCAGATCTAGCTTGA 1842 0.525 MPHAATQSQNIKQRVLTCLTKLSDRDTQAAGATELESIARALDPHSVPVFLSCIHSTDTSDKTPVRKQCVHLVATLSHAHGDALSPFLSKILASLVRRLRDPDSSVRAACADSCAALSARVTRQPFSAFLKPLAEALFTEQDLNSQGAAALCLASAIDGAPDPDPARLARLLPRFERLLKSKVFRAKPALLVLVGSVVEARGAASRAALRNLVPCLVEALGSEDWATRKGAAEALKKLASVERDNLAEFKAGCLKVFENRRFDKVKLVREVMNQMLEAWKQIPDVSDEFSPPPQSQSSSKENASDGRYPPVSQNSCSPGSVMSKLRKKSSPVSKSTPPDRSAARNAKRMSSGVLQKLNQNQWDVQIAVSNVPDRGERQQKDEDVLERSKKDKSRFFKPETKRALFDKNSDDKMHKFGGSKAGSRVVPCSEESQDSGHVCNVTKDLHRNDKESEELSLIRAQLVQIEKQQSSLLDLLQKFMGSSENGMRTLETRVHGLELALDEISYDLAVSSGRITKSDAPKNTCCLLPGAEFLSSKFWKKTQGRYSSYRFSRTGSTPLLASSHYRANRNAESNRSTSHRFGVHGDGNFITNPLAEIKINSREISGSTRSDLA 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02097 613 ProSiteProfiles HEAT repeat profile. 212 248 IPR021133 -
Pumo10g02097 613 MobiDBLite consensus disorder prediction 288 340 - -
Pumo10g02097 613 FunFam TORTIFOLIA1-like protein 3 isoform A 3 357 - -
Pumo10g02097 613 Pfam HEAT repeat 212 241 IPR000357 GO:0005515
Pumo10g02097 613 Coils Coil 448 468 - -
Pumo10g02097 613 Gene3D - 4 373 IPR011989 -
Pumo10g02097 613 MobiDBLite consensus disorder prediction 368 400 - -
Pumo10g02097 613 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 7 573 IPR033337 GO:0005874|GO:0008017
Pumo10g02097 613 MobiDBLite consensus disorder prediction 374 400 - -
Pumo10g02097 613 SUPERFAMILY ARM repeat 8 296 IPR016024 -
Pumo10g02097 613 MobiDBLite consensus disorder prediction 283 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02097 Pumo-Chr10 28284325 28289235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02097 - - gmx:100776414 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02097 10 28284325 28289235 Pumo10g02097 10 28284325 28289235 ECH
Pumo4g01356 4 17191485 17193769 Pumo10g02097 10 28284325 28289235 PCT