Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00766 ATGGCTGATTCTGAAAGTGGAGAATTCTGGGGTTGCTTTGGGGGCTTTGCTCCTCTTCCACGGAGAACAGTCAGTGATGATGATAAGCCTGCTGATTCTCGTCCTCCAAAGCTACTTTGTGTTGACAAGGGGAAGGCAGAACCTATTGAAAACGATTCTTTGACAAAGGAATTACTGGACACAAACAAATGCTATATTCTAGATTGTGGGTTGGAAGTTTTTGCATGGATGGGAAGAAACACATCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCTGCAGATGAGTTAGTCAGTGGCAGCGGTCGACCAAAGTCCCATATTATTCGTGTAATTGAAGGATTTGAAACAGTAATGTTCAAGTCCAAGTTTGATTCTTGGCCTCAGGCAAGTCAAGTAACAATGTCTGAAGAAGGTCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGATTGGATGTCAAGGGTCTTGTGAAAGCTGAGCCCGTAAAAGAAGAACCTCAACCCCACATAGATTGCACAGGACATCTGCAGGTTTGGCGTGTGAATGGCCAGGAAAAGATTCTTCTTCCAGCCACTGATCAGTCAAAATTTTATAATGGAGATTGCTACATCTTTCAATATTCATATCCTGGAGAAGATAAGGAAGAGTATCTTATAGGAACATGGATTGGAAAGACTAGTGTTGAGAGAGAGCTTCATGCTCTTTCACTAGCAAGCAAAATGGTTGAGTCAATGAAGTTTCTTCCTTCCCAGGCTCGTATCCATGAAGGCAGTGAACCAATTCAATTTCATGCCATCCTCCAAAGCTGTATTGTTTATAAGGGTGGACTTAGTGATGGATACAAGAATTACATTGCGGAGAAGGGAATTCCAGATGAGACATACAATGAGGATGGTGTTGCATTATTCCGCATCCAGGGCACTGGACCAGACAATATGCAAGCTATACAAGTTGAACCAGTCGCTTCCTCCTTGAATTCCTCTTATTGCTACATACTTCATAGCGGGCTCACTGTTTTTAATTGGTCTGGAGGTTTAGCAACTTCAGATGACCAGGAGCTTGTTGAGAGAATGCTGGATTTGATTAAGCCGGATCTACAATGCAAACCACTAAAGGAAGGCGTAGAATCGGAACAGTTTTGGGATTTGTTGGGGGGAAAAACAGAATATCCCAGTCAAAAGATCACGAGGGATGATGAAAATGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGGAAATTTAAAGGTGAAAGAGATTTACAACTTTTCCCAGGATGATTTGATGACAGAAGATATTTGCATATTGGATTGTCACTCGGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACTCAAAGAGTAGAATGCAGGCTCTAACAATAGGCGAGAAATTTCTTGAGCATGATTTTCTCCTAGAAGCATTATCTCGTGAAGCTCCAATATTTATTGTCATGGAAGGTAGTGAACCACCTTTCTTCACTCGCTTCTTTAAATGGGAGTCTGCAAAATCTGCTATGCTAGGAAATTCATTTCAAAGGAAGCTTGCAATCGTGAAAAATGGGGGTACGCCACTTATGGTTAAACATAAACGAAGAGCACCAGTAAATTTTGGGGGAAGGTCTAGTGGTGTGCCAGATAAATCCCAGCGTTCCCGCAGCATGTCTGTCAGTCCTGATCGTGTTCGTGTGAGGGGCAGATCTCCGGCCTTTAATGCACTAGCAGCTAATTTTGAGAGTCCAAATGCTAGGAACCTTTCAACCCCACCTCCAATGATTAGAAAACTGTACCCAAAATCTATGGCACAGGATACATCAAAACTGGAATCTAAATCTTCAGCCATAGCTCATCTTACTTCTAGTTTTGAACAACCATCGGCACGAGAAAATTTGATTCCTCGGTCACAAAGAGGAAGTTCAGTTACCACCAAATCAAACCCTGAGACAAATGACAAGGAGGGTTCTATGAGCAGCAGAATAGAATCTCTTACTATACAGGAGGATGTGAAAGAGGGTGAAACTGAAGATGATGAAGGTCTCCCAGTTTACCCATATGAACGCATTAACACAGCTTCTACAGATCCTGTAGAAGATATTGACGTGACTAAACGAGAGGCTTATCTGTCATCTGCAGAGTTCAAGAGAAATTGGGGATGGCAAAGAATGAATTTTACAAGTTGCCAAAATGGAAACAGAACAAACTCAAAATGGCAGTTCAGTTGTTCTGAGTTAAAGTACACTTCACCTTCTGTCTGCTCCGTGCATTTTAAGTTGCAGTAA 2277 0.4207 MADSESGEFWGCFGGFAPLPRRTVSDDDKPADSRPPKLLCVDKGKAEPIENDSLTKELLDTNKCYILDCGLEVFAWMGRNTSLDERKSASGAADELVSGSGRPKSHIIRVIEGFETVMFKSKFDSWPQASQVTMSEEGRGKVAALLKRQGLDVKGLVKAEPVKEEPQPHIDCTGHLQVWRVNGQEKILLPATDQSKFYNGDCYIFQYSYPGEDKEEYLIGTWIGKTSVERELHALSLASKMVESMKFLPSQARIHEGSEPIQFHAILQSCIVYKGGLSDGYKNYIAEKGIPDETYNEDGVALFRIQGTGPDNMQAIQVEPVASSLNSSYCYILHSGLTVFNWSGGLATSDDQELVERMLDLIKPDLQCKPLKEGVESEQFWDLLGGKTEYPSQKITRDDENDPHLFSCNFSKGNLKVKEIYNFSQDDLMTEDICILDCHSEIFVWVGQQVDSKSRMQALTIGEKFLEHDFLLEALSREAPIFIVMEGSEPPFFTRFFKWESAKSAMLGNSFQRKLAIVKNGGTPLMVKHKRRAPVNFGGRSSGVPDKSQRSRSMSVSPDRVRVRGRSPAFNALAANFESPNARNLSTPPPMIRKLYPKSMAQDTSKLESKSSAIAHLTSSFEQPSARENLIPRSQRGSSVTTKSNPETNDKEGSMSSRIESLTIQEDVKEGETEDDEGLPVYPYERINTASTDPVEDIDVTKREAYLSSAEFKRNWGWQRMNFTSCQNGNRTNSKWQFSCSELKYTSPSVCSVHFKLQ 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00766 758 SUPERFAMILY Actin depolymerizing proteins 5 129 - -
Pumo4g00766 758 FunFam Villin-4 30 136 - -
Pumo4g00766 758 SUPERFAMILY Actin depolymerizing proteins 376 498 - -
Pumo4g00766 758 CDD gelsolin_S5_like 298 389 - -
Pumo4g00766 758 CDD gelsolin_S3_like 36 125 - -
Pumo4g00766 758 Gene3D Severin 303 392 IPR029006 -
Pumo4g00766 758 Pfam Gelsolin repeat 419 493 IPR007123 -
Pumo4g00766 758 Pfam Gelsolin repeat 52 119 IPR007123 -
Pumo4g00766 758 SUPERFAMILY Actin depolymerizing proteins 164 309 - -
Pumo4g00766 758 MobiDBLite consensus disorder prediction 535 562 - -
Pumo4g00766 758 MobiDBLite consensus disorder prediction 542 556 - -
Pumo4g00766 758 SUPERFAMILY Actin depolymerizing proteins 291 395 - -
Pumo4g00766 758 MobiDBLite consensus disorder prediction 618 679 - -
Pumo4g00766 758 PRINTS Gelsolin family signature 105 126 IPR007122 GO:0051015
Pumo4g00766 758 PRINTS Gelsolin family signature 454 473 IPR007122 GO:0051015
Pumo4g00766 758 PRINTS Gelsolin family signature 218 236 IPR007122 GO:0051015
Pumo4g00766 758 PRINTS Gelsolin family signature 193 209 IPR007122 GO:0051015
Pumo4g00766 758 PRINTS Gelsolin family signature 313 333 IPR007122 GO:0051015
Pumo4g00766 758 PRINTS Gelsolin family signature 250 270 IPR007122 GO:0051015
Pumo4g00766 758 PRINTS Gelsolin family signature 373 392 IPR007122 GO:0051015
Pumo4g00766 758 PRINTS Gelsolin family signature 425 447 IPR007122 GO:0051015
Pumo4g00766 758 ProSiteProfiles Headpiece (HP) domain profile. 676 741 IPR003128 GO:0003779|GO:0007010
Pumo4g00766 758 Gene3D Villin headpiece domain 679 739 IPR036886 GO:0003779|GO:0007010
Pumo4g00766 758 MobiDBLite consensus disorder prediction 1 37 - -
Pumo4g00766 758 FunFam Villin-like 1 394 515 - -
Pumo4g00766 758 CDD gelsolin_S6_like 402 499 - -
Pumo4g00766 758 CDD gelsolin_S4_like 170 266 - -
Pumo4g00766 758 FunFam Gelsolin 299 393 - -
Pumo4g00766 758 Gene3D Severin 393 516 IPR029006 -
Pumo4g00766 758 SMART VILL_6 404 500 IPR007122 GO:0051015
Pumo4g00766 758 SMART VILL_6 174 270 IPR007122 GO:0051015
Pumo4g00766 758 SMART VILL_6 300 387 IPR007122 GO:0051015
Pumo4g00766 758 SMART VILL_6 36 126 IPR007122 GO:0051015
Pumo4g00766 758 PANTHER VILLIN 3 726 IPR007122 GO:0051015
Pumo4g00766 758 Gene3D Severin 162 302 IPR029006 -
Pumo4g00766 758 Gene3D Severin 26 142 IPR029006 -
Pumo4g00766 758 MobiDBLite consensus disorder prediction 22 37 - -
Pumo4g00766 758 MobiDBLite consensus disorder prediction 618 662 - -
Pumo4g00766 758 SUPERFAMILY VHP, Villin headpiece domain 666 727 IPR036886 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00766 Pumo-Chr4 10046818 10055358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00766 - - gmx:100807762 1333.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00766 4 10046818 10055358 Pumo4g00766 4 10046818 10055358 ECH
Pumo2g01567 2 29319657 29331550 Pumo4g00766 4 10046818 10055358 PCT