Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01567 ATGGCAACTCTCCTCGCGTTAGTGAAGTTTTGCACAGTGCAGTGCAAAGTCTATGTTGGATGCAAATTTGAGGATGTGTGCGTTTTCTTCATTGGACTTGAAGTATGGCGTATTGAGAATTTTAATCCAGTTCCTGTCCCAAAGTCCTCTTATGGGAAATTTTTCACTGGAGACTCCTATGTGATCTTAAAGACAACTGCATCAAAAAGTGGTGCTCTGCGCCATGACATCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAAGTACAAGGCCATGAAACAGAAAAGTTTCTGTCTTATTTCAAACCATGTATTATCCCTCAAGAAGGTGGAGTTGCTTCTGGTTTCAAACATCCTGAGGCTGAAAAACATAAGACACGGTTGTTTGTATGCAGAGGGAAACATGTTGTACATGTCAAAGAGGTTCCATTTGCTAGAGCTTCACTCAACCATGATGATATTTTTGTTCTGGATACTGAATCGAAAATTTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAAGGGAAATGTGAGGTAGCTGCTGTTGAGGATGGAAAGTTGATGGCTGATCCTGAAACTGGGGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCACGAAAAACAGTCAGTGATGATGATAAGCCTACTGATTCTCGCCCTCCGAAGCTGCTTTGTGTTGAAAAGGGACAGGCAGAACCTGTTGAGACTGATTCTTTGAAAAGGGAATTACTAGACACAAATAAATGCTATATTCTTGATTGTGGGTTTGAAGTGTTTGTTTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGTTGCAGATGAGTTAGTCAGCGGCACTGATCAACTGAAACCCCAAATAATTCGTGTGATAGAAGGATTTGAAACAGTGATGTTCAGGTCCAAATTTGATTCTTGGCCTCAGACAGCTGATGTAACAGTATCTGAAGATGGTCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGAGTAAATGTAAAGGGCTTGTTGAAAGCTGATCCAGTCAGGGAAGAACCCCAACCCCACATCGATTGCACAGGACATTTGCAGGTTTGGCGCGTGAATGGTCAGGAGAAGATTCTTCTTCAAGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAGTATGCATATCCTGGAGAGGATAAAGAAGATTGTCTTATAGGAACGTGGATTGGAAAGAATAGTGCTGAGGAAGAACGAGCTTCTGCTAATTCATTGGCAAGCAAAATGGTTGAGTCAATGAAGTTTCTTGCTTCCCAGGCTCGTATATATGAAGGCAATGAACCAATTCAATTTCATTCTATCCTCCAAAGCTTCATTGTTTTTAAGGGTGGGCTTAGTGAAGGATACAAGACTTACATTGTGGAAAAGGAAATTCCTGATGAGACATACAATGAGAACGGTGTTGCATTATTCCGCATCCAGGGCTCTGGACCAGACAATATGCAAGCCATACAAGTTGAACCAGTTGCATCTTCCTTGAATTCCTCTTATTGTTACATACTTCATAATGGGCCTGCTGTCTTTACTTGGTCTGGAAACTCTACAAGTGCAGAAAACCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAGCCACAAAGGGAAGGTTCCGAATCTGAACAGTTTTGGGATTTGTTAGGAGGAAAATCAGAATATCCCAGTCAAAAGATTCTCAGAGAGCCTGAAAGTGATCCTCACCTATTTTCTTGTCACTTCTCGAAAGGAAATTTAAAGGTGACAGAGGTATACAACTTCTCCCAGGATGATTTGATGACAGAAGACATTTTCATCTTGGATTGTCACTCGGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACTCCAAGAGTAGAATGCAAGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTCTTCTAGAAAAATTATCTCGTGTAGCTCCAATATATGTTGTCATGGAAGGGAGTGAGCCACCCTTCTTCACACGCTTCTTTAAATGGGATTCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTGACAATTGTGAAAAGTGGGGGTGCTCCAGTTTTGGATAAACCCAAACGGAGAACACCAGTATCTTATGGGGGAAGGTCGAGTAGTGTGCCAGATAAATCCTCCCAACGTTCCTCCCGCAGCATGTCTGTCAGTCCTGATCGTGTTCGTGTGAGGGGCAGGTCTCCAGCCTTTAATGCCTTAGCAGCTACTTTTGAGAACCCTAATGCCAGAAACCTTTCCACCCCGCCTCCAGTAATTAGAAAGCTGTATCCAAAATCTGTGACACCAGATTCTGCAATACTGGCGCCAAAATCTGCAGCCATAGCTGCACTTACTTCTTCTTTTGAACAGCCACCTTCAGCACGAGAAACTATGATACCTCGGTCACTTAAAGTGAGTCCAGTAATTCCCAAATCAAACACTGAGAAAAATGACAAGGAGAATTCTGTGAGCACCAGAGTGGAATCTCTTACCATACAGGAAGATGTGAAAGAGGATGAAGTTGAAGATGAGGAAGGTCTTGTGATTTACCCATATGAACGCCTTAAAATAACATCCACAGATCCTGTACCAAATATTGATGTGACTAAGCGAGAGACTTATCTATCATCTGCGGAGTTCAAAGAGAAATTTGGGATGTCCAAGGATGCCTTTTACAAGTTGCCCAAATGGAAACAAAACAAACTCAAAATGGCTGTTCAGTTATTCTGA 2928 0.4211 MATLLALVKFCTVQCKVYVGCKFEDVCVFFIGLEVWRIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHPEAEKHKTRLFVCRGKHVVHVKEVPFARASLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEVAAVEDGKLMADPETGEFWGFFGGFAPLPRKTVSDDDKPTDSRPPKLLCVEKGQAEPVETDSLKRELLDTNKCYILDCGFEVFVWMGRNTSLDERKSASGVADELVSGTDQLKPQIIRVIEGFETVMFRSKFDSWPQTADVTVSEDGRGKVAALLKRQGVNVKGLLKADPVREEPQPHIDCTGHLQVWRVNGQEKILLQASDQSKFYSGDCYIFQYAYPGEDKEDCLIGTWIGKNSAEEERASANSLASKMVESMKFLASQARIYEGNEPIQFHSILQSFIVFKGGLSEGYKTYIVEKEIPDETYNENGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGNSTSAENQELVERMLDLIKPNLQSKPQREGSESEQFWDLLGGKSEYPSQKILREPESDPHLFSCHFSKGNLKVTEVYNFSQDDLMTEDIFILDCHSEIFVWVGQQVDSKSRMQALTIGEKFLEHDFLLEKLSRVAPIYVVMEGSEPPFFTRFFKWDSAKSAMLGNSFQRKLTIVKSGGAPVLDKPKRRTPVSYGGRSSSVPDKSSQRSSRSMSVSPDRVRVRGRSPAFNALAATFENPNARNLSTPPPVIRKLYPKSVTPDSAILAPKSAAIAALTSSFEQPPSARETMIPRSLKVSPVIPKSNTEKNDKENSVSTRVESLTIQEDVKEDEVEDEEGLVIYPYERLKITSTDPVPNIDVTKRETYLSSAEFKEKFGMSKDAFYKLPKWKQNKLKMAVQLF 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01567 975 ProSiteProfiles Headpiece (HP) domain profile. 910 975 IPR003128 GO:0003779|GO:0007010
Pumo2g01567 975 Gene3D Severin 145 258 IPR029006 -
Pumo2g01567 975 FunFam Villin-like 1 144 259 - -
Pumo2g01567 975 SUPERFAMILY Actin depolymerizing proteins 607 729 - -
Pumo2g01567 975 PANTHER VILLIN 32 965 IPR007122 GO:0051015
Pumo2g01567 975 FunFam Villin-4 397 531 - -
Pumo2g01567 975 Gene3D Severin 529 624 IPR029006 -
Pumo2g01567 975 MobiDBLite consensus disorder prediction 767 790 - -
Pumo2g01567 975 PRINTS Gelsolin family signature 685 704 IPR007122 GO:0051015
Pumo2g01567 975 PRINTS Gelsolin family signature 544 564 IPR007122 GO:0051015
Pumo2g01567 975 PRINTS Gelsolin family signature 423 439 IPR007122 GO:0051015
Pumo2g01567 975 PRINTS Gelsolin family signature 604 623 IPR007122 GO:0051015
Pumo2g01567 975 PRINTS Gelsolin family signature 481 501 IPR007122 GO:0051015
Pumo2g01567 975 PRINTS Gelsolin family signature 335 356 IPR007122 GO:0051015
Pumo2g01567 975 PRINTS Gelsolin family signature 448 466 IPR007122 GO:0051015
Pumo2g01567 975 PRINTS Gelsolin family signature 656 678 IPR007122 GO:0051015
Pumo2g01567 975 SUPERFAMILY Actin depolymerizing proteins 522 626 - -
Pumo2g01567 975 CDD gelsolin_S4_like 400 497 - -
Pumo2g01567 975 SMART VILL_6 149 246 IPR007122 GO:0051015
Pumo2g01567 975 SMART VILL_6 531 618 IPR007122 GO:0051015
Pumo2g01567 975 SMART VILL_6 31 129 IPR007122 GO:0051015
Pumo2g01567 975 SMART VILL_6 404 501 IPR007122 GO:0051015
Pumo2g01567 975 SMART VILL_6 266 356 IPR007122 GO:0051015
Pumo2g01567 975 SMART VILL_6 634 731 IPR007122 GO:0051015
Pumo2g01567 975 SMART VHP_1 940 975 IPR003128 GO:0003779|GO:0007010
Pumo2g01567 975 Pfam Gelsolin repeat 162 229 IPR007123 -
Pumo2g01567 975 Pfam Gelsolin repeat 40 123 IPR007123 -
Pumo2g01567 975 Pfam Gelsolin repeat 422 491 IPR007123 -
Pumo2g01567 975 Pfam Gelsolin repeat 649 724 IPR007123 -
Pumo2g01567 975 Pfam Gelsolin repeat 278 349 IPR007123 -
Pumo2g01567 975 CDD gelsolin_S1_like 31 136 - -
Pumo2g01567 975 CDD gelsolin_S2_like 150 235 - -
Pumo2g01567 975 FunFam Gelsolin 28 143 - -
Pumo2g01567 975 CDD gelsolin_S5_like 529 620 - -
Pumo2g01567 975 CDD gelsolin_S3_like 266 355 - -
Pumo2g01567 975 SUPERFAMILY Actin depolymerizing proteins 31 159 - -
Pumo2g01567 975 FunFam Villin-like 1 913 975 - -
Pumo2g01567 975 SUPERFAMILY Actin depolymerizing proteins 394 540 - -
Pumo2g01567 975 SUPERFAMILY VHP, Villin headpiece domain 900 975 IPR036886 GO:0003779|GO:0007010
Pumo2g01567 975 FunFam Gelsolin 532 624 - -
Pumo2g01567 975 Gene3D Severin 259 367 IPR029006 -
Pumo2g01567 975 MobiDBLite consensus disorder prediction 753 795 - -
Pumo2g01567 975 Gene3D Severin 400 514 IPR029006 -
Pumo2g01567 975 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 267 439 IPR036180 -
Pumo2g01567 975 Pfam Villin headpiece domain 940 975 IPR003128 GO:0003779|GO:0007010
Pumo2g01567 975 Gene3D Villin headpiece domain 913 975 IPR036886 GO:0003779|GO:0007010
Pumo2g01567 975 Gene3D Severin 625 744 IPR029006 -
Pumo2g01567 975 FunFam Villin-like 1 625 746 - -
Pumo2g01567 975 SUPERFAMILY Actin depolymerizing proteins 149 254 - -
Pumo2g01567 975 Gene3D Severin 29 144 IPR029006 -
Pumo2g01567 975 CDD gelsolin_S6_like 633 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01567 Pumo-Chr2 29319657 29331550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01567 - - gmx:100808499 1800.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01567 2 29319657 29331550 Pumo4g00766 4 10046818 10055358 PCT