Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00747 ATGATCATGATTCCGAAACAGACATCGCGGAGGAGTTTGGATGACTTGGCCTCATTATTGAATTATCCAATCCTTCTGTTGCGAGTCCCACATTGGATGGTTAACGAGCCTGAGCTGGTTCTGCCCGATGGTGTGGATAGTGCCGCTAGCCCTCGCTTTGTGGTGACGAGCCCTGGCTCGAGGGGGCGTGTTGCGAGTCCCACATCGGGTGAGCTGGTTCTGCCCGATGGTGTGGATAGTGCCGCTAGCCCTCGCTTTGTGGTGACGAGCCCTGGCTCGAGGGGGCGTGTTGCGAGTCCCACATCGGGTGCCATTCCTATTCCTAATCTGAGAGAAGTCCAGGCTGTGCAGTCCAATGTCCACGATGAGACACCGAAGCCGAAGTTGGATCCCACGTTTAAGCACTCAAAAGAGAAAAGAACCTTGAGAAAAGCCTACGGTGCTCTCAAAGACTCCACAACGGTTGGCCTAGCCAAGGTCAATAGCGAATACAAGGAATTGGATATTGCAATTGTGAAGGCTACAAGTCACGTAGAATATCCTCCTAAGGAACGTCATGTTAGAAAAATATTCTATGCAACTTCAGCACACCAACCGCGGGCAGATGTAGCTTACTGCATACACACACTTGCCAAGAGGCTTTCAAAGACACGGAATTGGATAGTTGCTATAAAGACATTGATAGTCATTCATAGAATATTGAGAGAAGGTGATCCTACTTTCAAAGACGACCTCATAAACTACGCGCGCAGGGGACATTTTCTTCAAATATCAAATTTCAAAGATGACTCAAGTCCTCTAGCTTGGGACTGTTCTGCATGGGTTCGAACCTATGCACTATTTTTAGAAGAAAGGCTTGAATGTTTTAGAATCCTTAAGTATGATATCGAAGCTGAACGTTTAACAAAACCATCACCAACTATAACTCAGGGACATAGCAGAACACGGATGTTGACTAGTGAAGGGCTTTTGGAGCAGCTACCTGCACTGCAGCAACTTCTATACCGACTATTTGGTTGTCAGCCTGAAGGATTGGCTTTCAGCAATTATCTAATACAGTATGCACTGGCCTTGGTATTGAAAGAGAGCTTCAAAATATATTGTGCCCTGAATGATGGAATCATAAATCTTGTGGATGTGTTCTTTGATATGCCAAAATATGATGCACTGAAGGCGTTACAAATTTATAAAAGAGCTGGCCAACAGGCTGAAAATCTTGCTGATTTCTATGAATACTGCAAGAGATTGGACCTTGCTAGGAATTTTCAATTTCCAATCTTGAGACAGCCACCTGCTTCTTTTCTTGCCACGATGGAAGAATACATTAAAGAAGCACCACTGACTGCTACTAAGAGACTGGAGTATCACGAAAGTGATCAATCACCTCAAAGAGAAGAAGCAGAACCCCAAGAATCTGAAAAGTCTCAAGCAAGTGCGAAAGCTGATGAAGAAGTCAATGAGGAAGAACCGGTAGATAAAGATGAAACACAGCCTAAGGAAGAGGAAGCTGAACTTCCTCCTTTGATATCAACTGATTCTACTGATGATTTGCTGGGTCTAAACGAAATAAATCCAAAAGCTCAAGAACTAGAAGAAAGCAATGCTTTGGCGCTTGCAATTGTACCATCCGGTGGACATAACTCAAACAATCTTGCTTTGACTAACATAAGCGGAACTTCTGGTTGGGAACTTGCACTGGTTACAACACCAAGTAACCATACAAGCCAAGCAACAGATCGCAAAATGGCTGGTGGGTTTGACAAGCTATTACTAGACAGTTTGTATGAAGATGAAAATGCCAGGAGACAACTTCAACTTCGAAATGCAGGCTATGGATATGAGGGAATGGATACACATAATCCATTTGATCATTATAATCAGCAGGATCCATTTGCAATGTCCAACAACATAGCACCTCCATCCAATGTGCAAATGGAATTCATGGCTCAGCAACAGCAGCAAATGATGTTCCAACAACAGCAACAACAATATAACATGATGATGGTCCCTTACCAGTATCCACAGACTCAATACAATCAACAAATGCCAGTTATGGGTTCTTTTAATCCATTTAGTGATCCCTTACCCATGCCTAGCTATTCTTATAGTTCCATGCATCATCAAGGAAACTACCACTTAATGTAG 2145 0.4354 MIMIPKQTSRRSLDDLASLLNYPILLLRVPHWMVNEPELVLPDGVDSAASPRFVVTSPGSRGRVASPTSGELVLPDGVDSAASPRFVVTSPGSRGRVASPTSGAIPIPNLREVQAVQSNVHDETPKPKLDPTFKHSKEKRTLRKAYGALKDSTTVGLAKVNSEYKELDIAIVKATSHVEYPPKERHVRKIFYATSAHQPRADVAYCIHTLAKRLSKTRNWIVAIKTLIVIHRILREGDPTFKDDLINYARRGHFLQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRILKYDIEAERLTKPSPTITQGHSRTRMLTSEGLLEQLPALQQLLYRLFGCQPEGLAFSNYLIQYALALVLKESFKIYCALNDGIINLVDVFFDMPKYDALKALQIYKRAGQQAENLADFYEYCKRLDLARNFQFPILRQPPASFLATMEEYIKEAPLTATKRLEYHESDQSPQREEAEPQESEKSQASAKADEEVNEEEPVDKDETQPKEEEAELPPLISTDSTDDLLGLNEINPKAQELEESNALALAIVPSGGHNSNNLALTNISGTSGWELALVTTPSNHTSQATDRKMAGGFDKLLLDSLYEDENARRQLQLRNAGYGYEGMDTHNPFDHYNQQDPFAMSNNIAPPSNVQMEFMAQQQQQMMFQQQQQQYNMMMVPYQYPQTQYNQQMPVMGSFNPFSDPLPMPSYSYSSMHHQGNYHLM 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00747 714 PANTHER CLATHRIN ASSEMBLY PROTEIN 140 656 IPR045192 GO:0048268|GO:0072583
Pumo4g00747 714 SMART enth_2 165 296 IPR013809 -
Pumo4g00747 714 MobiDBLite consensus disorder prediction 455 506 - -
Pumo4g00747 714 SUPERFAMILY GAT-like domain 313 444 - -
Pumo4g00747 714 MobiDBLite consensus disorder prediction 455 519 - -
Pumo4g00747 714 ProSiteProfiles ENTH domain profile. 159 296 IPR013809 -
Pumo4g00747 714 Pfam ANTH domain 166 444 IPR011417 GO:0005543
Pumo4g00747 714 SUPERFAMILY ENTH/VHS domain 166 297 IPR008942 -
Pumo4g00747 714 FunFam Clathrin assembly protein AP180 141 296 - -
Pumo4g00747 714 Gene3D - 141 296 IPR008942 -
Pumo4g00747 714 Gene3D ANTH domain 309 458 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pumo4g00747 714 FunFam Putative clathrin assembly protein 308 456 - -
Pumo4g00747 714 CDD ANTH_N 167 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00747 Pumo-Chr4 9736121 9744260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00747 K20044 - gmx:100818165 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00747 4 9736121 9744260 Pumo4g00747 4 9736121 9744260 ECH
Pumo4g00747 4 9736121 9744260 Pumo2g01590 2 29909493 29915361 PCT