Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01590 ATGGGAACGTTTCAGAGCTTCAGAAAAGCCTATGGAGCTCTCAAGGACTCCACCAAGGTTGGCCTCGCCAAAGTCAATAGTGAATACAAGGAATTGGATATTGCAATTGTTAAAGCTACCAATCACGTGGAATATCCTCCCAAGGAACGTCATGTTCGAAAAATATTCTATGCAACATCAGCACACCAGCCACGGGCAGATGTGGCATACTGCATTCACAAACTTTCCAAGAGACTTTCCAAGACGCGAAGTTGGATAGTTGCTATAAAGACATTGATAGTCATTCATAGGACTTTAAGAGAGGGTGATCCTACCTTTAGAGAGGAGATTCTTAACTACTCACGCAGAGGACACATTCTCCAAATATCCAATTTCAAAGATGACTCAAGCCCTCTAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACTATATTTAGAAGAAAGACTTGAATGCTTCAGAGTCCTTAAATATGACATAGAATCTGAGCGTTTAACAAAAGCATCACCAGCTGCAAATAAAGCACATAGCAGAACTCGGTCGTTGGCTAGTGATGATCTGTTGGAGCAGCTACCTGCACTGCAGCAACTTCTATACCGCCTTATTGGTTGTCAGCCTGAAGGATGTGCTTACAGCAATTATCTAGTACAGTATGCGTTGGCCCTGGTTTTGAAAGAGAGTTTCAAAATATACTGCGCACTCAATGATGGAATCATCAATCTTGTGGACATGTTCTTTGATATGACAAGACATGACGCAGTGAAGGCTCTAAACATTTATAAAAGAGCTGGCCAACAGGCTGAGAATCTTGCTGACTTCTATGAATACTGCAAAGGCTTGGAACTTGCTAGGAATTTCCAATTTCCAACCCTGAGACAGCCACCTCCCTCTTTCCTTGCAACAATGGAAGAATACATTAAAGAAGCACCCCAGACAGGCTATGTTAATAAGAGACTGGAGTATCAGGAAAATGATGAATCGTCTAAAGAAGAATCAGAATCCAATGAATCTGCATCGCCTCAAAAAGATGAGGAACAAGCTGAGGAAGTCAATGAGGAAGAGCCAGTGGAAGAGGAAGAAGAACAACCTAAGGAGGAGGAGGAGGCAGAGTCTCCTCCTTTGATATCAACTGATGATGGTACAAATGATTTGCTGGGTCTTAATGAAATAAATCCAAAAGCTATGGAACTGGAGGAAAACAATGCTTTGGCTCTTGCAATTGTACCACCCGGTGGAAATAATTCAAACAATCTTGCTTTGAGTAACATTGACGGGACCACTGGTTGGGAACTTTCACTGGTTACAACACCAAGTAACCATTCCAGTCAAGCCCCAGATCGCAGAATGGCTGGTGGTTTTGACAAGCTATTACTGGACAGTCTGTATGAAGATGAAAATGCCAGGAGACAGATTCAACTCCAAAATGCAGGTTATGGACATGGTGGAACAATGGATATGCAGAACAACCCATTTGATCATTATAACCAGCATGATCCATTTGCAATGTCCAACAACATAGCACCTCCCCCCAGTGTGCAAATGGCACTAATGTCTCAACAGCAGCAGCAGCAACAAATGATGTTCCAACAGCAGCAAATGATGTACCAACAACCACAACAGCACAACAACAACATGATGATGGTCCCTCACCAGCAGCAACCACATAACCAATACCCTCAACAGATGCAGAATTCAGGTTCTCATAATCCATTTGGAGATCCCTTACCGGTACCAAACTATAACCATAGTTCCATGCCCCAACAGGGAAATTACAATTTAATGTAG 1788 0.4273 MGTFQSFRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATNHVEYPPKERHVRKIFYATSAHQPRADVAYCIHKLSKRLSKTRSWIVAIKTLIVIHRTLREGDPTFREEILNYSRRGHILQISNFKDDSSPLAWDCSAWVRTYALYLEERLECFRVLKYDIESERLTKASPAANKAHSRTRSLASDDLLEQLPALQQLLYRLIGCQPEGCAYSNYLVQYALALVLKESFKIYCALNDGIINLVDMFFDMTRHDAVKALNIYKRAGQQAENLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEEYIKEAPQTGYVNKRLEYQENDESSKEESESNESASPQKDEEQAEEVNEEEPVEEEEEQPKEEEEAESPPLISTDDGTNDLLGLNEINPKAMELEENNALALAIVPPGGNNSNNLALSNIDGTTGWELSLVTTPSNHSSQAPDRRMAGGFDKLLLDSLYEDENARRQIQLQNAGYGHGGTMDMQNNPFDHYNQHDPFAMSNNIAPPPSVQMALMSQQQQQQQMMFQQQQMMYQQPQQHNNNMMMVPHQQQPHNQYPQQMQNSGSHNPFGDPLPVPNYNHSSMPQQGNYNLM 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01590 595 MobiDBLite consensus disorder prediction 322 387 - -
Pumo2g01590 595 FunFam Putative clathrin assembly protein 173 321 - -
Pumo2g01590 595 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Pumo2g01590 595 MobiDBLite consensus disorder prediction 347 368 - -
Pumo2g01590 595 MobiDBLite consensus disorder prediction 332 346 - -
Pumo2g01590 595 MobiDBLite consensus disorder prediction 556 595 - -
Pumo2g01590 595 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Pumo2g01590 595 SUPERFAMILY GAT-like domain 178 309 - -
Pumo2g01590 595 PANTHER CLATHRIN ASSEMBLY PROTEIN 7 528 IPR045192 GO:0048268|GO:0072583
Pumo2g01590 595 FunFam Clathrin assembly protein AP180 6 161 - -
Pumo2g01590 595 Gene3D - 5 161 IPR008942 -
Pumo2g01590 595 MobiDBLite consensus disorder prediction 556 571 - -
Pumo2g01590 595 CDD ANTH_N 32 154 - -
Pumo2g01590 595 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Pumo2g01590 595 Gene3D ANTH domain 173 326 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pumo2g01590 595 MobiDBLite consensus disorder prediction 581 595 - -
Pumo2g01590 595 SMART enth_2 30 161 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01590 Pumo-Chr2 29909493 29915361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01590 K20044 - gmx:100783084 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01590 2 29909493 29915361 Pumo2g01590 2 29909493 29915361 ECH
Pumo4g00747 4 9736121 9744260 Pumo2g01590 2 29909493 29915361 PCT