Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00729 ATGATGTACGAGCAGCAGCAACGTTTTCAGCAACCGATGACGATGAAGATGGATATGAGGAGGAAGACGGAGAAAAGCGGCATAGAGGAAGAGAGGCTTGAAATAGTCGACTTGAGTGGCATGTCCTTGGATTCCCTTCCCAACCCCTCTCTTAATTTAGCCATCATTTGCAAGTTGGACCTCTCTAATAACAATCTTCAGAATATACCGGAGTCCTTAACGGCGAGACTGCTGAACATGGTGGTGTTGGACGTGCACTCCAACCAGCTTAGGACCCTCCCCAATTCCATTGGCTGCCTCTCTAAGCTCAAGGTTTTGAATGTCTCTGGCAACCTCATCGAATACCTTCCCAAAACAATTGAAAATTGCAGAAGCTTAGAAGAGTTGAATGCGAACTTCAACAAGTTGATCCAGCTGCCAGACACGATAGGGTATGAACTGATAAACCTGAAGAAGCTATCAGTGAACTCCAACAAGCTGGTGTTCCTTCCTCGGTCGACCTCTCACCTCACCGCTCTGAAGATTCTAGACGCGCGTTTGAACTGCCTCAGGTCTCTCCCAGAAGACTTGGAGAATCTGATAAACCTCGAAACCCTAAACGTGAGCCAGAACTTCCAGTACCTGGATTCTCTACCCTACTCGGTGGGCCTCCTCTTGTCCCTGGTGGAACTGGACGTCAGCTACAACAAGATCAAGTCCCTACCCGACTCCATCGGGTGCCTCAAGAAGCTCCAGAAGCTGAGTGTGGAAGGGAACCCTCTAACTTCACCAGCACCCGATGTGGTGGAGCAGGGATTGCATGCGGTGAAGGAGTACCTGTGCCAGAAGATGAACGCGGGCCATCAGAGCCCAACTAAGAAGAAGTCTTGGGTCGGGAGGTTGGTCAAGTATGGGACCTTCAATGGACACAGCAGCAGAGGTGGGGCCCGCGAGGAACGTGAGGCTTTCATTATGCCTGATTATACACCAATTGATGGCCTTGCTTCGCCACGTTACATGGGAATGTTTTCACCTCGTCGCCTCTTCTCACCACGTACTTACTTCTCCAATTGA 1053 0.5005 MMYEQQQRFQQPMTMKMDMRRKTEKSGIEEERLEIVDLSGMSLDSLPNPSLNLAIICKLDLSNNNLQNIPESLTARLLNMVVLDVHSNQLRTLPNSIGCLSKLKVLNVSGNLIEYLPKTIENCRSLEELNANFNKLIQLPDTIGYELINLKKLSVNSNKLVFLPRSTSHLTALKILDARLNCLRSLPEDLENLINLETLNVSQNFQYLDSLPYSVGLLLSLVELDVSYNKIKSLPDSIGCLKKLQKLSVEGNPLTSPAPDVVEQGLHAVKEYLCQKMNAGHQSPTKKKSWVGRLVKYGTFNGHSSRGGAREEREAFIMPDYTPIDGLASPRYMGMFSPRRLFSPRTYFSN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00729 350 Gene3D Ribonuclease Inhibitor 145 275 IPR032675 -
Pumo4g00729 350 Gene3D Ribonuclease Inhibitor 2 143 IPR032675 -
Pumo4g00729 350 SMART LRR_bac_2 53 72 - -
Pumo4g00729 350 SMART LRR_bac_2 77 96 - -
Pumo4g00729 350 SMART LRR_bac_2 123 142 - -
Pumo4g00729 350 SMART LRR_bac_2 241 259 - -
Pumo4g00729 350 SMART LRR_bac_2 218 237 - -
Pumo4g00729 350 SMART LRR_bac_2 170 189 - -
Pumo4g00729 350 SMART LRR_bac_2 100 119 - -
Pumo4g00729 350 SMART LRR_bac_2 147 166 - -
Pumo4g00729 350 Pfam Leucine rich repeat 58 113 IPR001611 GO:0005515
Pumo4g00729 350 SMART LRR_typ_2 53 76 IPR003591 -
Pumo4g00729 350 SMART LRR_typ_2 218 240 IPR003591 -
Pumo4g00729 350 SMART LRR_typ_2 77 99 IPR003591 -
Pumo4g00729 350 SMART LRR_typ_2 147 169 IPR003591 -
Pumo4g00729 350 SMART LRR_typ_2 241 264 IPR003591 -
Pumo4g00729 350 SMART LRR_typ_2 124 146 IPR003591 -
Pumo4g00729 350 SMART LRR_typ_2 170 193 IPR003591 -
Pumo4g00729 350 SMART LRR_typ_2 100 123 IPR003591 -
Pumo4g00729 350 ProSiteProfiles Leucine-rich repeat profile. 220 241 IPR001611 GO:0005515
Pumo4g00729 350 PANTHER - 33 278 - -
Pumo4g00729 350 SUPERFAMILY L domain-like 33 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00729 Pumo-Chr4 9414804 9418686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00729 52 261 Receptor kinase-like Gene Family AT5G27060 30.374 3.41e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00729 - - gmx:100783239 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00729 4 9414804 9418686 Pumo4g00729 4 9414804 9418686 ECH
Pumo4g00729 4 9414804 9418686 Pumo2g01606 2 30329812 30334004 PCT