Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01606 ATGTACCAATTGCAACAGTTTCATCAGCCCATGATGAAGATGGACACGAATCACTCGATGAGGAAGAGGGAGAGAAGCAAAGCCATGGAGAAAGAGAGGCTTCAAGTGATGGACTTGAGTGGCATGTCCTTGGAGTTTCTTCCCAAACCTTCCCTTGATTTAGCTACCATTTGCAAGTTGGACCTATCCAATAACAATCTCCAGGAAATTCCGGAATCCTTAACGGCAAGACTACTAAACGTGGAGGTGTTGGACGTGCGATCCAACCAGCTCAAGTCCCTCCCCAATTCCATTGGCTGCCTCTCTAAGCTCAAGGTTTTGAATGTCTCTGGCAACTTCATCGAATTCCTCCCCAAAACCATTGAGAATTGCAGAGCCTTAGAGGAACTGAATGCCAACTTCAACAAGCTGAGCAAGCTGCCAGACACAATAGGGTTTGAGCTCATAAACCTCAAGAAGCTCTCAGTGAACTCCAACAAGCTTGTGTTTCTTCCAAGCTCCACCTCACACCTAACAGCTTTGAAGGTTCTTGATGCACGCTTGAATTGCCTAAGGGCACTTCCTCAGGACCTTGAGAATCTCATCAACCTTGAGACCCTTAATGTGAGCCAGAACTTCCAGTACCTTGAGACCCTCCCTTACTCCATAGGGCTCCTATTGTCTCTTGTTGAACTTGATGTCAGCTACAACAACATCAAGACCTTGCCTGAGTCCATTGGATGCCTCAAGAATCTCCAGAAGTTGAGTGTTGAAGGGAACCCTCTTACTTGTCCCCCTATGGAGGTGGTGGAGCAGGGACTGCATGTGGTGATGGAGTACATGCAGCATAAGATTAACTCAAGTGATCAAAATTCAACTAAGAAAAGGTGGTGGATGGGGAAGATTGTGAAATGTGGAACCTTCAATGTTAAGCAAATGAGAGGTGGGAAACGACCTGAACATGTGGGTTACAACATGCTAAAGCACCAGAATATCAATGGCCTTGCTTCCCCAGGCCTCATGGGGATGCTCTCGCCTCTTCGCCTCTTCTCGCCCCGTCGTTCCCCCCGTCACTCCGTCAGTTGA 1065 0.4761 MYQLQQFHQPMMKMDTNHSMRKRERSKAMEKERLQVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNFIEFLPKTIENCRALEELNANFNKLSKLPDTIGFELINLKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPQDLENLINLETLNVSQNFQYLETLPYSIGLLLSLVELDVSYNNIKTLPESIGCLKNLQKLSVEGNPLTCPPMEVVEQGLHVVMEYMQHKINSSDQNSTKKRWWMGKIVKCGTFNVKQMRGGKRPEHVGYNMLKHQNINGLASPGLMGMLSPLRLFSPRRSPRHSVS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01606 354 ProSiteProfiles Leucine-rich repeat profile. 80 101 IPR001611 GO:0005515
Pumo2g01606 354 PANTHER - 148 266 - -
Pumo2g01606 354 SMART LRR_typ_2 219 242 IPR003591 -
Pumo2g01606 354 SMART LRR_typ_2 78 100 IPR003591 -
Pumo2g01606 354 SMART LRR_typ_2 101 124 IPR003591 -
Pumo2g01606 354 SMART LRR_typ_2 54 77 IPR003591 -
Pumo2g01606 354 SMART LRR_typ_2 148 170 IPR003591 -
Pumo2g01606 354 SMART LRR_typ_2 125 147 IPR003591 -
Pumo2g01606 354 SMART LRR_typ_2 171 194 IPR003591 -
Pumo2g01606 354 MobiDBLite consensus disorder prediction 1 20 - -
Pumo2g01606 354 Pfam Leucine rich repeat 59 112 IPR001611 GO:0005515
Pumo2g01606 354 Gene3D Ribonuclease Inhibitor 206 279 IPR032675 -
Pumo2g01606 354 SMART LRR_bac_2 124 143 - -
Pumo2g01606 354 SMART LRR_bac_2 101 120 - -
Pumo2g01606 354 SMART LRR_bac_2 219 238 - -
Pumo2g01606 354 SMART LRR_bac_2 194 215 - -
Pumo2g01606 354 SMART LRR_bac_2 54 73 - -
Pumo2g01606 354 SMART LRR_bac_2 78 97 - -
Pumo2g01606 354 SMART LRR_bac_2 148 167 - -
Pumo2g01606 354 SUPERFAMILY L domain-like 33 260 - -
Pumo2g01606 354 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
Pumo2g01606 354 ProSiteProfiles Leucine-rich repeat profile. 56 77 IPR001611 GO:0005515
Pumo2g01606 354 Gene3D Ribonuclease Inhibitor 2 205 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01606 Pumo-Chr2 30329812 30334004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01606 19 290 Receptor kinase-like Gene Family AT5G51350 30.769 5.15e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01606 - - gmx:100775711 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01606 2 30329812 30334004 Pumo2g01606 2 30329812 30334004 ECH
Pumo4g00729 4 9414804 9418686 Pumo2g01606 2 30329812 30334004 PCT