Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00657 ATGGCTTCAACTTCAGCAGTTTCAATGGCTGTACCACTAACTCACGCCAGCCAGAAGAGGGTGGTTGGCACCTCCGAGGCATTCTTTAAGGCACCGTTGCCTCTGCGGCCTTCAAAGGCATTGGCAGCATCAAAAGCCAATGGAAGGTTTCAAGTGAGGGCTTCCATGAAAGAGAAAGTTGTGACGGGTTTGACGGCGGCTGCATTGGCAGCTTCAATGATGGTTCCGGAAGTGGCTGAAGCTGCTGTTACGCCTTCTCTCAAGAACTTCTTGCTCAGCATCGCCGCTGGTGGAGTTGTCGCTGCAGCAATCGTTGGTGCCGTAATTGGTGTTGCCAATTTCGATCCCGTCAAGCGAAGCTGA 363 0.5262 MASTSAVSMAVPLTHASQKRVVGTSEAFFKAPLPLRPSKALAASKANGRFQVRASMKEKVVTGLTAAALAASMMVPEVAEAAVTPSLKNFLLSIAAGGVVAAAIVGAVIGVANFDPVKRS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00657 120 Pfam Photosystem II reaction centre X protein (PsbX) 83 120 IPR009518 GO:0009523|GO:0015979|GO:0016020
Pumo4g00657 120 Gene3D Single helix bin 82 120 - -
Pumo4g00657 120 PANTHER OS07G0673550 PROTEIN 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00657 Pumo-Chr4 8624965 8626153 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00657 - - gmx:100306291 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00657 4 8624965 8626153 Pumo4g00657 4 8624965 8626153 ECH
Pumo4g00657 4 8624965 8626153 Pumo2g01679 2 31523041 31523864 PCT