Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01679 ATGGCTTCCACTTCTGCAGTTTCAATGGCTATGCCAATAACTTATGCCAGCCAGAAGAGGGTGGTGCCTAGCTCTGATGCATTCTTCAAGCCACTGCCTCTACGGTCTTCAAAGGCAGTGGCAGCATCAAATCCCAATGGAATTCAAGTGAGGGCCTCCATGAAGGAGAAAGTTGTGACAGGGATCACAGCAGCTGCATTGACAGCTTCAATGATGGTTCCTGATGTGGCCGAGGCTGCCGTTACACCTTCTCTGAAGAACTTCTTGCTCAGCATCGCAGCAGGTGGAGTTGTTGTTGTAGTAATTGTTGGTGCTGTGATTGGTGTTGCCAATTTCGATCCTGTCAAGCGAAGCTGA 357 0.493 MASTSAVSMAMPITYASQKRVVPSSDAFFKPLPLRSSKAVAASNPNGIQVRASMKEKVVTGITAAALTASMMVPDVAEAAVTPSLKNFLLSIAAGGVVVVVIVGAVIGVANFDPVKRS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01679 118 Pfam Photosystem II reaction centre X protein (PsbX) 81 118 IPR009518 GO:0009523|GO:0015979|GO:0016020
Pumo2g01679 118 Gene3D Single helix bin 80 118 - -
Pumo2g01679 118 PANTHER OS07G0673550 PROTEIN 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01679 Pumo-Chr2 31523041 31523864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01679 - - gmx:100306291 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00657 4 8624965 8626153 Pumo2g01679 2 31523041 31523864 PCT