Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00542 ATGGACTATACCTTGATCCAATATAATGTGATGGCTTGGGAAGGGAGGGCTTATGACTACTGTATGGAAAACCTTAAGAATATGGGTTTCCCTGTTGATGGACTTGCCTTTGATCCTGACCTGGTAATTAGAGGCCTTGTCATAGACAAAGAGAAAGGCAATTTGGTTAAAGCTGATCGGTTTGGTTACATAAAAAGAGCCATACATGGCACCAAAATGTTATCTACTCGAGTTGTGAGTGAGATGTATGGGAGAGAACTGGTGGACCTGCGAAAGGAGAGTCGATGGGAGTTTCTCAATACACTGTTTTCCGTGTCTGAAGCTGTGGCCTACATGCAGATGGTTGACAGATTGGATGATGGGACTATACCAGCAGATCTTGGCCCTCTTGATTATAAAGGGCTATATAAGGCTGTTGGAAAAGCTCTCTTTTGGGCACATGTTGAAGGTCGCCTTAAGAGTGAGATCATGTCTAAGCCTGAACTGTTTGTGGAGCCTGATCCAGAATTACCTTTGGCACTTTTGGATCAGAAGGAGGCTGGCAAAAAACTTCTGCTAATTACCAACTCAGATTATCTTTACACAGACAAAATGATGCGACATTCTTTTAATAGATTCCTTCCCAACGATATGGGTTGGCGAGATCTATTTGACATTGTAATTGTCTCAGCAAGAAAACCAGAGTTCTTCCAAACGTCACACCCCATGTATGAAGTGGTCACAGGCGAGGGTCTTATGCGTCCATGCTTCAAAGCTCAAACTGGTGGTTTGTACTCGGGGGGAAGTGCACAAATGGTTGAAAATTCCCTAAATATTCATGGAGATGAGATATTGTATGTTGGCGACCATATTTACACTGATGTCAGTCAATCCAAAGTCCATTTGCGATGGCGAACAGCATTGATTTGTCGAGAACTAGAAGAAGAGTACAATGCCTTAATTGGTAGCCGGGGTTATAGAGAATCATTGGTGGAGCTTATAAATCAAAAGGAGGTTGTAGGGGATCTCTTTAACCAACTTCGGCTGGCTCTGCAGAGGCGAAGCAAAGACCGTCCTGCTCAAACCCTAGCAGCAACTAACATGAATGATGAAGACCTCACTGATAGCATGCAAAAGCTACTTATTGTTATGCAAAGACTGGATGAGAAAATTGCTCCAATGCTGGAGGCAGATGGGGAGCTCTTCAATTCAAGGTGGGGTTTTCTATCTCGTGCTGGACTGTGGGATAAAAGCCACCTGATGAGACAAATTGAGAAATATGCTGATATTTATACATCTAGGGTGTCAAATTTTTTGTATTATACGCCCTTCATGTATTTTCGATCTCAGGAACAGAACCTTGCGCATGACTCATACACATACTATTGTTCACAACTCTATAATGAGAATTCTTCCTAG 1398 0.4256 MDYTLIQYNVMAWEGRAYDYCMENLKNMGFPVDGLAFDPDLVIRGLVIDKEKGNLVKADRFGYIKRAIHGTKMLSTRVVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVDRLDDGTIPADLGPLDYKGLYKAVGKALFWAHVEGRLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYLYTDKMMRHSFNRFLPNDMGWRDLFDIVIVSARKPEFFQTSHPMYEVVTGEGLMRPCFKAQTGGLYSGGSAQMVENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYNALIGSRGYRESLVELINQKEVVGDLFNQLRLALQRRSKDRPAQTLAATNMNDEDLTDSMQKLLIVMQRLDEKIAPMLEADGELFNSRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFRSQEQNLAHDSYTYYCSQLYNENSS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00542 465 FunFam Haloacid dehalogenase hydrolase 142 333 - -
Pumo4g00542 465 Gene3D - 146 333 IPR023214 -
Pumo4g00542 465 NCBIfam HAD-IG family 5'-nucleotidase 1 323 IPR008380 -
Pumo4g00542 465 SUPERFAMILY HAD-like 1 452 IPR036412 -
Pumo4g00542 465 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 1 450 IPR008380 -
Pumo4g00542 465 CDD HAD_cN-II 1 306 - -
Pumo4g00542 465 Pfam 5' nucleotidase family 1 451 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00542 Pumo-Chr4 7122342 7127370 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00542 - - gmx:100815862 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00542 4 7122342 7127370 Pumo4g00542 4 7122342 7127370 ECH
Pumo4g00542 4 7122342 7127370 Pumo2g01850 2 34828632 34843858 PCT