Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01850 ATGGTTGCAACAATCATGGTTTCCCTTGTAGGAATTGATGGACATGCTGCATTTGAAGGTCCAATTGAGGAGGTGGCCAGAACAGAGGCTAGAGAAGTTGAAGATTTACTGAAAAAATTGGATATTCCGAGTCCTTCTTTGTCTAGAAATTCACCTCGTGGAATATTCTGCACCCGTACACTGAATCTACGGTCAATTAGTGCCATTGGATATGACATGGACTATACCTTGGTGCATTATAATGTGAAGGCTTGGGAAGGGCGGGCTTATGACTACTGTATGGAAAACCTCAAGAATATGGGTTTCCCTGTTGATGGACTTGCATTTGATCCAGACCTGGTTATTAGAGGCCTTGTCATAGATAAAGAGAGAGGCAATTTGGTTAAAGCTGATCGATTTGGTTATATAAAAAGAGCCATGCATGGAACCAAGATGTTATCTACTCGTGCTGTGAGTGAGATGTATGGGAGAGAACTGGTGGACCTGCGGCAAGTGAGTCGATGGGAGTTTCTTAACACATTGTTCTCTGTGTCTGAAGCTGTGGCTTACATGCAGATGGTTGACAAATTGGATGATGGGGTTATACCATCCAATCTTGGCTCCTTCGATTATAAAGGGCTTTATAAGGCTGTTGGGAAAGCTCTCATCGCAGCACACGTAGAAGGCTGCCTCAAGAGTGAGATTATGTCTAACCCTGAACAGTTCGTGGAGCCTGATCCGGAATTACCCTTCGCACTTTTGGATCAGAAAGAGGCAGGCAAAAAACTTGTGCTTATTACCAACTCAGATTATCATTATACAGAAAAAATGATGCATCATTCATTTAATAGATTCCTTCCCAATGACATGGGTTGGCGAGATTTATTTGACATTGTAATTGTCTCAGCAAACAAACCAAAATTCTTCCAAATGTCACACCCCATGTATGAGGTGGTGACTGACGAGGGCCTGATGCGTGCATGCTTTAAAGCTCAAACTGGTGGTTTGTACTCAGGGGGTAGTGCACAGATGGTTGAAAGTTCCCTAAATATACATGGAGATGAGATACTGTATATTGGAGACCATATTTACACTGATGTTAGTCAATCCAAAGTCCATTTACGATGGCGGGCAGCATTGATTTGTCGGGAACTGGAAGAAGAATACACTGCCCTAATTCGTAGCTGGGGTCGTAGACAATCATTGGTGGAGCTTATAAATCAAAAGGAGACTGTTGCTGCAACTGACATGGATGATGAAAATCTTACTGAAAGAATGCAAAAGTTACTTCTTGTTATGCAAAGACTAGATGGAAAAATTGCTCCAATGCTAGAGGCAGATGGGGAGCTCTTTAACAAAAGGTGGGGCTATCTATCACGTGCTGGATTGTGGGATAAAAGCCACTTGATGAGACAAATTGAGAAGTATGCAGATATATATACCTCTAGGGTGTCAAATTTTTTATATTACACACCCTTTATGTATTTCCGCTCTCAGGAACAGAGCCTTGCGCATGATTCATACACACACTATAGTTCTCAACTTGATAAGTTTCCTTCCTATGGAAAATTGGACCAAAATTGA 1563 0.4178 MVATIMVSLVGIDGHAAFEGPIEEVARTEAREVEDLLKKLDIPSPSLSRNSPRGIFCTRTLNLRSISAIGYDMDYTLVHYNVKAWEGRAYDYCMENLKNMGFPVDGLAFDPDLVIRGLVIDKERGNLVKADRFGYIKRAMHGTKMLSTRAVSEMYGRELVDLRQVSRWEFLNTLFSVSEAVAYMQMVDKLDDGVIPSNLGSFDYKGLYKAVGKALIAAHVEGCLKSEIMSNPEQFVEPDPELPFALLDQKEAGKKLVLITNSDYHYTEKMMHHSFNRFLPNDMGWRDLFDIVIVSANKPKFFQMSHPMYEVVTDEGLMRACFKAQTGGLYSGGSAQMVESSLNIHGDEILYIGDHIYTDVSQSKVHLRWRAALICRELEEEYTALIRSWGRRQSLVELINQKETVAATDMDDENLTERMQKLLLVMQRLDGKIAPMLEADGELFNKRWGYLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFRSQEQSLAHDSYTHYSSQLDKFPSYGKLDQN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01850 520 Gene3D - 213 406 IPR023214 -
Pumo2g01850 520 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 48 499 IPR008380 -
Pumo2g01850 520 SUPERFAMILY HAD-like 52 501 IPR036412 -
Pumo2g01850 520 Pfam 5' nucleotidase family 55 500 IPR008380 -
Pumo2g01850 520 CDD HAD_cN-II 56 378 - -
Pumo2g01850 520 FunFam Haloacid dehalogenase hydrolase 214 405 - -
Pumo2g01850 520 NCBIfam HAD-IG family 5'-nucleotidase 55 388 IPR008380 -
Pumo2g01850 520 PIRSF NT5C2 34 518 IPR016695 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01850 Pumo-Chr2 34828632 34843858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01850 - - vun:114174902 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00542 4 7122342 7127370 Pumo2g01850 2 34828632 34843858 PCT