Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00381 ATGCTTGCAGAACAGAAATCCCAAAAGACATACTCGACAGTCTCCGAGGTATTGGAGGAAGTAAAGAGAATGACAGACATAGGGTTCCCAATAGCAGCCATGAGCCTTGTGGGGTACCTCAAAAACATGACCTTAGTTGTGTGCATGGGAAGGTTGGGAAGCCTGGAGTTAGCTGGAGGTTCCTTGGCCATAGGCTTCACCAACATAACCGGTTACTCTGTCCTCTCAGGTCTAGCCATGGGCATGGAGCCCCTCTGCACCCAAGCCTTCGGTTCTCGAAACTTCTCCTTACTCTATCTAACTTTGCAGAGAACAATTCTCATGTTACTCCTGTTCTCTCTCCCCATTTCTCTTCTTTGGCTCAACCTCGAACCTCTCATGCTTTGCCTTCATCAGAATCCAGACATAACCCGAGTAGCAACCCTCTATTGCCGCTTCGCAATCCCAGACCTCGTTGCCAATAGCTTCCTCCACCCTCTTCGTATTTATCTACGCAGCAAAGGCACAACTTGGCCACTATTGTGGTGCACTTTACTATCCATTCTTCTACACCTTCCAACCCTCACTTTTTTAACCTTCAAACTTAACCTTGGCGTGCCGGGAATCGCTATTTCATCCTTTGTTGCCAATTTTAGCAACCTTTTCTTCCTTCTTTTATACATGTTCTATACACGTGTCCGCAAGGAGTCTTTACACGTGCCGTTACTAATGTCTCGTCCCATGTCACATGATGTAATAACATGTATCAGTACTAGTACTATTGCCAAGGAATGGGGTGTGCTAATGAAATTTTCAATACAAAGTTGTCTAGCTGTTTGCTTGGAATGGTGGTGGTACGAGTTGATGACAATTTCAGCAGGTTACCTTCACAACCCTCGTGTTGCTCTGGCCACTGCTGGCATAGTGATTCAAACCACATCTCTTATGTACACTTTGCCAACAGCACTAAGTTCATCGGTGTCAACCAGAGTAGGCAATGAACTTGGCGCGGGGCAAGGTGAAAGGGCAAGTTTGTCAACGGTGGTAGCCATAGGATTAGCACTTATAAGCTCAATTTTTGGTTTGTTGTGGACCACAATGGGAAGAGAAAGGTGGGGGAGAGTGTTCACTAGTGATAGTGAGGTGTTACAATTGACCATGGCAGTGTTACCTATAATTGGACTGTGTGAGTTAGCCAATTGTCCACAAACCACAAGCTGTGGAATCCTTAGAGGAAGTGCTAGGCCTGGTGTTGGAGCTGTTATAAACTTTTGCTCTTTTTACTTGGTAGGTGCACCAGTGGCAATTGTTTTGGCCTTTGTTTGGAAACTTGGGATGGTGGGTCTGTGTTATGGGTTGCTGGCTGCACAGATCGCATGTGTGGTGTCAATTTTTGTTGTGGTGTACAAGACTGATTGGGAAAGGGAGTCATTGAAGGCTAGGTGCTTGGTGGGAAAGAGTTCATGTGCCACATTTGCATATGAGGACCAAACAGTCAAATGTGAAGAAGGTGTTGTCTTTCTCAAAGAGAACAACTCCGAAAAGTGA 1527 0.4565 MLAEQKSQKTYSTVSEVLEEVKRMTDIGFPIAAMSLVGYLKNMTLVVCMGRLGSLELAGGSLAIGFTNITGYSVLSGLAMGMEPLCTQAFGSRNFSLLYLTLQRTILMLLLFSLPISLLWLNLEPLMLCLHQNPDITRVATLYCRFAIPDLVANSFLHPLRIYLRSKGTTWPLLWCTLLSILLHLPTLTFLTFKLNLGVPGIAISSFVANFSNLFFLLLYMFYTRVRKESLHVPLLMSRPMSHDVITCISTSTIAKEWGVLMKFSIQSCLAVCLEWWWYELMTISAGYLHNPRVALATAGIVIQTTSLMYTLPTALSSSVSTRVGNELGAGQGERASLSTVVAIGLALISSIFGLLWTTMGRERWGRVFTSDSEVLQLTMAVLPIIGLCELANCPQTTSCGILRGSARPGVGAVINFCSFYLVGAPVAIVLAFVWKLGMVGLCYGLLAAQIACVVSIFVVVYKTDWERESLKARCLVGKSSCATFAYEDQTVKCEEGVVFLKENNSEK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00381 508 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 466 - -
Pumo4g00381 508 Pfam MatE 268 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo4g00381 508 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo4g00381 508 CDD MATE_eukaryotic 20 472 IPR045069 GO:0042910|GO:1990961
Pumo4g00381 508 NCBIfam MATE family efflux transporter 30 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00381 Pumo-Chr4 5189712 5192366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00381 K03327 - gmx:100801932 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00381 4 5189712 5192366 Pumo4g00381 4 5189712 5192366 ECH
Pumo4g00381 4 5189712 5192366 Pumo2g01367 2 20451535 20453305 PCT