Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01367 ATGGTTGCGGAGGAGAAATCCCAAAAGACACACCCGACAACTGCTGAGGTAGTGGAGGAGCTAAAGAGAATGGGGGACATAGGAGTTCCAATAGCAGCCATGAGCCTTGTGGGATACATCAAAAACATGGTCTTAGTTGTGTGCATGGGAAGGTTGGGAAGCCTTGAGCTAGCTGGTGGTGCTTTGGCCATAGGCTTCACCAACATAACCGGTTTCTCAGTCCTCTCAGGTTTGGCCATGGGAATGGAACCTCTTTGCACACAAGCCTTTGGTTCAAGAAACTTCTCCTTAGTCTCTCTCACTCTACAAAGGACAATTTTCATGTTATTGGTGGCTTCACTACCCATTTCTCTCTTGTGGCTGAAGCTTGAACCTCTCATGCTGTGGCTTCACCAAAACCCTGAGATAACCAAAGTGGCAAGCGTCTATTGCTTCTTCTCCATCCCTGACCTCATTGCCAACAGCTTCCTTCACCCAATCCGCATCTATCTACGTAGCAAAGGGACAACCTGGCCTCTATTGTGGTGCACTTTGCTTTCCATTCTCATACACATCCCTGTCGTGACTTTTTTTACCTTCAAGCTTCACTTTGGTGTAGCCGGGATTGCTGTGTCAGCTTTTGTTGCCAACTTCAACACCCTTTTCTTCCTCCTATCATACATGCTCTACATGCGTGTCTCAAAGGGGTCACTTTCCATGCCTTTATTAATAACTCTCCCCTTGTCATCACGACAACAAGACCAAACCTCATTAACCTCGAGTATTAGTGTTAGTGCCACAACAAAAACAACTTCACTAGGCAAAGAGTGGGGCATGCTAATAAGGTTTTCCATTCAAAGTTGCTTAGGAGTGTGCTTGGAGTGGTGGTGGTACGAGTTCATGACGATTCTCGCGGGCTACCTTTACAACCCGCGTGTTGCTTTGGCCACTGCTGGCATAGTGATACAAACAACATCTCTCATGTACACTTTACCAACTGCTTTGAGTGCTTCAGTGTCAACAAGAGTGGGGAACGAGCTTGGGGCAGGTCAACCCGAAAGGGCAAGGTTGTCAACAATTGTAGCAATAGGAATGTCACTTGCAAGCTCAATATTGGGGCTGTTATGGACCACATTGGGGAGAGAGAGATGGGGGAGGGTGTTCACAAGTGATAGTGAGGTGTTGGAACTAACCATGAGTGTGTTGCCCATAATTGGGGTGTGTGAGTTAGCAAATTGTCCTCAAACCACAAGCTGTGGAATCCTTAGGGGGAGTGCAAGGCCTGGTGTCGGGGCAGGGATAAATTTTTACTCATTTTACTTGGTGGGGGCACCAGTGGCCATAGTGATGGCATTTGTTTGGAAACTAGGGTTGGTGGGTCTTTGCTATGGGCTGCTGGCAGCACAGATAGCATGTGTGGTCTCTATTCTAGTTGTGGTATACAACACAGATTGGGAAAGGGAGTTATTGAAGGCAAAAAGCTTGGTGGGAAAGACTTCATGTGATCACACAATGGAACATCATGGAGACCAAACAGTCAAATGTGAAGAAGGTATTGTCTTTCTCAATCAGAACAATACCTTTACCTCCCAAAAGTGA 1578 0.4664 MVAEEKSQKTHPTTAEVVEELKRMGDIGVPIAAMSLVGYIKNMVLVVCMGRLGSLELAGGALAIGFTNITGFSVLSGLAMGMEPLCTQAFGSRNFSLVSLTLQRTIFMLLVASLPISLLWLKLEPLMLWLHQNPEITKVASVYCFFSIPDLIANSFLHPIRIYLRSKGTTWPLLWCTLLSILIHIPVVTFFTFKLHFGVAGIAVSAFVANFNTLFFLLSYMLYMRVSKGSLSMPLLITLPLSSRQQDQTSLTSSISVSATTKTTSLGKEWGMLIRFSIQSCLGVCLEWWWYEFMTILAGYLYNPRVALATAGIVIQTTSLMYTLPTALSASVSTRVGNELGAGQPERARLSTIVAIGMSLASSILGLLWTTLGRERWGRVFTSDSEVLELTMSVLPIIGVCELANCPQTTSCGILRGSARPGVGAGINFYSFYLVGAPVAIVMAFVWKLGLVGLCYGLLAAQIACVVSILVVVYNTDWERELLKAKSLVGKTSCDHTMEHHGDQTVKCEEGIVFLNQNNTFTSQK 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01367 525 CDD MATE_eukaryotic 20 481 IPR045069 GO:0042910|GO:1990961
Pumo2g01367 525 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo2g01367 525 Pfam MatE 281 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo2g01367 525 NCBIfam MATE family efflux transporter 30 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo2g01367 525 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01367 Pumo-Chr2 20451535 20453305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01367 K03327 - gmx:100785533 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01367 2 20451535 20453305 Pumo2g01367 2 20451535 20453305 ECH
Pumo4g00381 4 5189712 5192366 Pumo2g01367 2 20451535 20453305 PCT