Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00371 ATGTTGGACACTCTGTCTTTGACTCCCGAGCGTGATCTTTCGGATGTTCAAGCCTACAAGAAGTTGCTCGAGGCCATTGACAAGCGATCAGATACGCTTAAGAGGCTGTCGGCTGAAATTCAACTTAACGAAAAGCGTAGGTCCACATTGGAATTGTTGCGCCCGAAGAAGGAACTAGTAGAGGAAGTTCCATTGGAACCTTTTATTCCTCTTACTGAAGAGGAAGAAGTTGAGGTTGCATGTGCCTTTTCTGCCAACAGGAGAAAGATCTTGGTTGCCCATGAGAAATCTTGCATTGAGATCTCAGGAGAAAAGTTTCAATGCCTTAGACCGGGTGCATGGTTAAACGACGAGGTAATAAATTTGTACCTTGAATTGCTGAAAGAGAGGGAGAGAAGAGAGCCGCAGAAGTTTCTGAACTGTCATTTTTTCAACACCTTTTTCTACAAGAGGTTAATAAGTGGCAAGAATGGTTATGATTTCAAATCTGTGAGGAGGTGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAAATATTTGTACCTATCCATAAAGAGATCCATTGGTGCTTGGCTGTTATCAATAAGAAAGACAAGAAATTTCAGTATCTGGACTCACTGAGAGGAACGGATACCCAAGTGATGAAAGTTCTGGCTAGCTATATTGTTGATGAAGTAAAGGACAAGACCGGAAAAGATATTGATGTAAGTTCTTGGGAAAAAGAATTTGTTGAAGACCTTCCTGAGCAGCAGAATGGGTATGATTGTGGGGTGTTTATGATCAAATACGCTGACTTGTATAGCAGAAACTTGGGGCTGTGTTTCAACCAGGAACACATGTCTTACTTTCGGCGCAGAACAGCTAAGGAGATCTTGAGATTAAAAGCTAACTAA 906 0.4161 MLDTLSLTPERDLSDVQAYKKLLEAIDKRSDTLKRLSAEIQLNEKRRSTLELLRPKKELVEEVPLEPFIPLTEEEEVEVACAFSANRRKILVAHEKSCIEISGEKFQCLRPGAWLNDEVINLYLELLKERERREPQKFLNCHFFNTFFYKRLISGKNGYDFKSVRRWTSQKKLGYGLHECDKIFVPIHKEIHWCLAVINKKDKKFQYLDSLRGTDTQVMKVLASYIVDEVKDKTGKDIDVSSWEKEFVEDLPEQQNGYDCGVFMIKYADLYSRNLGLCFNQEHMSYFRRRTAKEILRLKAN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00371 301 ProSitePatterns Intermediate filament (IF) rod domain signature. 16 24 IPR018039 -
Pumo4g00371 301 SUPERFAMILY Cysteine proteinases 67 300 IPR038765 -
Pumo4g00371 301 Coils Coil 19 39 - -
Pumo4g00371 301 Gene3D Adenoviral Proteinase; Chain A 58 299 - -
Pumo4g00371 301 ProSiteProfiles Ubiquitin-like protease family profile. 99 271 IPR003653 GO:0006508|GO:0008234
Pumo4g00371 301 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 56 294 - -
Pumo4g00371 301 FunFam Ubiquitin-like-specific protease ESD4 41 299 - -
Pumo4g00371 301 Pfam Ulp1 protease family, C-terminal catalytic domain 114 295 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00371 Pumo-Chr4 5033705 5038050 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00371 K08592 - gmx:100797013 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00371 4 5033705 5038050 Pumo4g00371 4 5033705 5038050 ECH
Pumo4g00371 4 5033705 5038050 Pumo2g01388 2 20624873 20638871 PCT