Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01388 ATGGGTGCGATGACGGCAAACCGCAAGCGCACCGAAGAATGCATGAACGTAAACCTCACCAATTCCGGAAAACGTGCCAAATTCTCGACCAAACCCGTTCCGTCCGCCACCAGCACCGTCGCGAGACTCTCCCGGTACCCGGAGGTTCACGCGCCGTTGGCTAGGGAGGTTCACGCGCCGTGCCGGCCGCGAAAATTCGAACGCGCTAGGGTTAGTGTTAGTGTCAGCGACGCCATGGGGAACGTTCTGGCCGCGAAGTACAATGAGGCGAAGCATTCGGCGTCGGCGAAATGGAGGATCTTGGTGGAGAAGGGGAAGGAGGTGATAGAGGTGGACGCAGAGACAGAGAGTGAAAAGCCTCGGTTCGGGAGTTACGAGGATTCGAGTGTGGAAGAGGCGCGTGGTGATGGTGACAAGGTTGTTAGGGTTCAGCAGCAGTCACAGTCAACGCTGTCGTTTGATTCGGAAATGACGAATGCGGAGTTGAAGGTGGTGAGTGGAGGGAAGGTGTGTGGTTCTGAGACGCAGCGTGATTTGGAAAATGTTAATGTGTATAAGAAGTTGCTTGAGGATGTTGGGAGGAGAAGTGGCACGCTTCAGAGGCTGAATTATGAGATTGAGTTGAATGAGAAGCGCAGGGACCATTACAATTTGTTGCGGCCCAAGAAGGAATTGGTTCAGGAACAGGAAGTGCCACAAGAGCCTTTTGTTGCTCTTACAAGTGAGGAGGAAGATGAGGTTGAACGCGCCTTTTCTGCCAACCGGTGGAGGATCTTGGTTACCCATGAGAATTCTAACATTGAGATCACTGGAGAGAAGTTTCAGTGCCTTAGACCGACTGGATGGTTAAATGATGAGGTGATAAATTTGTACCTGGAATTGCTTAAGGAGAGGGAGCAAAGAGAACCACAGAAATTTCTGAAATGTCATTTTTTCAATACCTTTTTCTACAAAAAGTTAATAAGTGGTCCGAGAGGTTATGATTTCAAATCTGTTAGAAGATGGACAAGCCAACGGAAATTGGGATACAGTCTAATTGAATGTGATAAAATATTTGTACCTATCCATCAAGAGATACATTGGTGCTTGGCAGTTATCAATAAGAAAGATAAGAAATTCCAGTATCTTGACTCAATGAAAGGAGAGGATCGTTCTGTGCTAGAAAAGCTGGCTAAATATTTTGCGGATGAAGTAAATGACAAGACTGGAAAAGATATTGATGTAAATACCTGGAAAAAAGAATTTGTGAAAGACCTTCCTGTGCAGAAAAATGGGTATGATTGCGGGGTGTTTATGATCAAATATGCAGACTTTTATAGCAGGGGTCTGGAGCTTTGTTTTAACCAGGAAAACATGTCTTACTTCCGGCGTAGGACAGCCAAGGAGATCTTGAGATTGAAAGCTGAATGA 1410 0.4645 MGAMTANRKRTEECMNVNLTNSGKRAKFSTKPVPSATSTVARLSRYPEVHAPLAREVHAPCRPRKFERARVSVSVSDAMGNVLAAKYNEAKHSASAKWRILVEKGKEVIEVDAETESEKPRFGSYEDSSVEEARGDGDKVVRVQQQSQSTLSFDSEMTNAELKVVSGGKVCGSETQRDLENVNVYKKLLEDVGRRSGTLQRLNYEIELNEKRRDHYNLLRPKKELVQEQEVPQEPFVALTSEEEDEVERAFSANRWRILVTHENSNIEITGEKFQCLRPTGWLNDEVINLYLELLKEREQREPQKFLKCHFFNTFFYKKLISGPRGYDFKSVRRWTSQRKLGYSLIECDKIFVPIHQEIHWCLAVINKKDKKFQYLDSMKGEDRSVLEKLAKYFADEVNDKTGKDIDVNTWKKEFVKDLPVQKNGYDCGVFMIKYADFYSRGLELCFNQENMSYFRRRTAKEILRLKAE 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01388 469 Gene3D Adenoviral Proteinase; Chain A 225 467 - -
Pumo2g01388 469 Pfam Ulp1 protease family, C-terminal catalytic domain 282 463 IPR003653 GO:0006508|GO:0008234
Pumo2g01388 469 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 133 462 - -
Pumo2g01388 469 MobiDBLite consensus disorder prediction 119 138 - -
Pumo2g01388 469 SUPERFAMILY Cysteine proteinases 235 467 IPR038765 -
Pumo2g01388 469 ProSiteProfiles Ubiquitin-like protease family profile. 267 439 IPR003653 GO:0006508|GO:0008234
Pumo2g01388 469 FunFam Ubiquitin-like-specific protease ESD4 226 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01388 Pumo-Chr2 20624873 20638871 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01388 K08592 - gmx:100802161 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00371 4 5033705 5038050 Pumo2g01388 2 20624873 20638871 PCT