Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00200 ATGTCTATGAAGAGCAAGGGAGGGGGTGTAGAACTGAGTGGAAGGAATGTCTTACATAGGAAATGGGCTCTTCTGCTTTGTGTGGCAAGCTTCTGTGCTGGAATGTTTTTCACCAATAGGATATGGTCGATGGCTGAATATAAAGAAATTTCAAGGACTTCTACTGAGATTGAAAGAATAAAATTAAACTCTGAGGGTTGTAATCTAAATCTAGTTGTAAGGCCTAACTCCAATTACAGTCAGGTGGAAGTCTCAAATACACAGAATGTTGTCAAGAAACCAAGGAAGTCAGAGACAGTTGAATCAACTACAAGGAAAAAATATTTCATGGTTATAGGGATCAATACAGCTTTTAGTAGCAGGAAGCGCAGAGATTCTGTTCGCTCAACTTGGATGCCACGAGCTGAGGAAAGAAAGAAGTTGGAGGAAGAAAAGGGCATAATCATACGATTTGTTATAGGTCACAGTTCTACATCTGGTGGCATTCTTGACAAAGCTATTGAAGCAGAGGAGAGGCTTCATGCTGACTTCTTGAGGCTGAACCACATCGAGGGATACCTAGAACTATCAGCTAAGACAAAGATCTACTTTTCAACTGCTGTTGCCTTGTGGGATGCAGAATTTTATGTCAAAGTTGATGATGATGTTCATGTGAATTTAGCAACACTTGGATTGACTCTGACTATGCATCGTATGAAACCTCGGGTGTATATTGGGTGCATGAAATCTGGTCCTGTCCTTGCTCAGAAGGGAGTGAAATACCATGAACCAGAATACTGGAAGTTTGGTGAGGTGGGAAACAAGTACTTCCGTCATGCTACAGGACAATTATATGCCATTTCACAAGATTTGGCTACTTATATATCAATAAATCAGGATGTGCTGCATAAATATGCTAATGAAGATGTCTCATTGGGATCTTGGTTTATTGGTTTAGATGTGGATCATGTTGATGATAGGAGAATGTGTTGTGGCACACCCCCTGATTGCGAGTGGAAAGCGCAGGCCGGTAACATCTGTGTTGCCTCGTTTGATTGGAAATGCAGTGGGATCTGCAGATCTGTTGAGAGGATGAAAGAAGTTCACCAGCGTTGTGGGGAGGATGAAAACGCATTGTGGAGTGCAACCTTCTAA 1134 0.4171 MSMKSKGGGVELSGRNVLHRKWALLLCVASFCAGMFFTNRIWSMAEYKEISRTSTEIERIKLNSEGCNLNLVVRPNSNYSQVEVSNTQNVVKKPRKSETVESTTRKKYFMVIGINTAFSSRKRRDSVRSTWMPRAEERKKLEEEKGIIIRFVIGHSSTSGGILDKAIEAEERLHADFLRLNHIEGYLELSAKTKIYFSTAVALWDAEFYVKVDDDVHVNLATLGLTLTMHRMKPRVYIGCMKSGPVLAQKGVKYHEPEYWKFGEVGNKYFRHATGQLYAISQDLATYISINQDVLHKYANEDVSLGSWFIGLDVDHVDDRRMCCGTPPDCEWKAQAGNICVASFDWKCSGICRSVERMKEVHQRCGEDENALWSATF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00200 377 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 88 318 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pumo4g00200 377 Pfam Domain of unknown function (DUF4094) 19 93 IPR025298 -
Pumo4g00200 377 Gene3D - 97 322 - -
Pumo4g00200 377 FunFam Hexosyltransferase 102 323 - -
Pumo4g00200 377 Pfam Galactosyltransferase 122 319 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00200 Pumo-Chr4 2397864 2403971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00200 1 377 Glycosyltransferase AT1G05170 66.098 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00200 K20855 - gmx:100810168 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00200 4 2397864 2403971 Pumo4g00200 4 2397864 2403971 ECH
Pumo4g03663 4 75962777 75967462 Pumo4g00200 4 2397864 2403971 ECH
Pumo11g01212 11 41465632 41469939 Pumo4g00200 4 2397864 2403971 ECH