Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01212 ATGACTTGGAAAAGCAGAGGAGAATTGCCTTCTAGAAGCGTTATATCCCAGAGATGGGCACTGTTTCTCTGCTTAGGAAGTTTCTGTGCTGGAATGCTCTTCACTACCAGGATATGGACTATACCTGAAAACAACAAAGGACTAGCACGACCAACAGCCTCAGAAGCTGAAAAATTGAATTTAGTTTCAGAAGGTTGCAATTCCAGAATTTTGCAAGAGATTGAAATGAAGCGCGATAAAGACATCTATGGTGAAGTTTTCAAGAGTCATAATTCCATACAAACTTTGGACAAGACTATTTCAAACTTAGAGATGGAATTGGCTGCTGCAAGAGCAGCTCAAGAATCTATACGAAGTGGTGCTCCTGTTTCAGATGATATAAGGTTGAGTGAATCATCGGGTAAGAGGAAATACCTTATGGTCATTGGTATTAATACTGCATTTAGCAGCAGGAAAAGAAGGGACTCGGTTCGAGCCACTTGGATGCCACAAGGTGAGAAAAGAAAGAGGCTAGAGGAGAAGGGCATTATCATCCGCTTTGTAATTGGACACAGTGCTACATCAGGTGGTATTCTTGACAGAGCTATTGAAGCTGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCAGCAAAGACAAAAACCTACTTTGCCACTGCTGTGAACTTATGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCATGTTAATATAGCAACATTGGGAGAAACTCTTGTTAGACACCGATCAAAACCTCGGATATACATTGGATGCATGAAATCTGGACCTGTCCTATCTCAAAAAGGGGTAAGGTACCATGAACCTGAGTACTGGAAATTTGGAGAGGCTGGAAACAAGTACTTCCGTCATGCCACAGGACAGTTGTATGCCATTTCAAACGATTTGGCCACATACATATCAATTAACCAGAATGTTCTTCACAAGTATGCCAACGAGGATGTGTCACTAGGATCCTGGTTTATCGGACTTGATGCGGAGCATATAGATGATCGAAGACTTTGTTGTGGCACTCCTCCAGATTGTGAGTGGAAGGCCCAAGCAGGCAACATTTGTGTTGCATCATTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCTGAGAGGATTAAAGAGGTACATAGGAGGTGTGGAGAGGGTGAGAATGCTTTGTGGAGTGCCTCTTTCTAA 1221 0.4251 MTWKSRGELPSRSVISQRWALFLCLGSFCAGMLFTTRIWTIPENNKGLARPTASEAEKLNLVSEGCNSRILQEIEMKRDKDIYGEVFKSHNSIQTLDKTISNLEMELAAARAAQESIRSGAPVSDDIRLSESSGKRKYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKRLEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERIKEVHRRCGEGENALWSASF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01212 406 Coils Coil 93 113 - -
Pumo11g01212 406 Gene3D - 135 348 - -
Pumo11g01212 406 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Pumo11g01212 406 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 97 346 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pumo11g01212 406 FunFam Hexosyltransferase 132 352 - -
Pumo11g01212 406 Pfam Galactosyltransferase 152 347 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01212 Pumo-Chr11 41465632 41469939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01212 1 406 Glycosyltransferase AT1G05170 78.676 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01212 K20855 - gmx:100794838 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01212 11 41465632 41469939 Pumo11g01212 11 41465632 41469939 ECH
Pumo11g01212 11 41465632 41469939 Pumo4g00200 4 2397864 2403971 ECH
Pumo4g03663 4 75962777 75967462 Pumo11g01212 11 41465632 41469939 PCT