Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03597 ATGAGTTACCGAAGAGATAATCGCTCCTCCAGATCATCACTTGTAGATGGTTTTGATGGTTTGGAGGAGGGTGGTCTAAGGGCTTCTTCTTCTTACTCACGTGAAATTAATGAGCATGATAATGATAAAGCCATAGAGAGTTTGCAGGACAGAGTTTCCTTTCTGAAACGATTAACAGGTGATATACATGAGGAGGTTGAGAGTCATAACCAGTTGCTCGACCGGGTGGGTAACAAAATGGATGGATCAAGGGGTATGATGATGGGAACCATGGATCGATTCAAGAAGGTTTTTGAGAAGAAATCAGCGAGGAAAACATGCTCACTTGTGGGGTATTTCACACTTGCCTTCATATTCATATACTATCTTATTAGGATGCTTGGATATTTTACACTTGGGTAA 402 0.4104 MSYRRDNRSSRSSLVDGFDGLEEGGLRASSSYSREINEHDNDKAIESLQDRVSFLKRLTGDIHEEVESHNQLLDRVGNKMDGSRGMMMGTMDRFKKVFEKKSARKTCSLVGYFTLAFIFIYYLIRMLGYFTLG 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03597 133 CDD SNARE_Bet1 38 96 IPR039899 -
Pumo3g03597 133 FunFam bet1-like SNARE 1-1 42 106 - -
Pumo3g03597 133 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 35 97 IPR000727 -
Pumo3g03597 133 SUPERFAMILY SNARE fusion complex 34 97 - -
Pumo3g03597 133 Gene3D - 42 106 - -
Pumo3g03597 133 PANTHER GOLGI SNARE BET1-RELATED 8 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03597 Pumo-Chr3 75733610 75737700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03597 K08504 - gmx:100818014 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02834 5 75550130 75553712 Pumo3g03597 3 75733610 75737700 PCT