Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03146 ATGGAGGTTGGGGAAATGGACAGAAAGGAGCCACAAATTGAGGTTCCTTGGAGCCCCGGCACCCCTGTTAAGCCCGTTCCTCTAAAACCAGTGCCGATCTACATGCCTGGGGAGAGAAACCAAATGGGTCATCATGCAAATGGAGCAGTTGCATGTGCTGAATTTTCACTTGGCCAAGAGAAAATTTGTGGGTCAGGTGATGGGTCAAATGTTGCCGATGACAGTGGCAAAACTTGTGAACAGACAGCTTCGGATGCTGTTTCCGGCTACAGCAAACTCGGGTTTTGTGAACAATTGTTCGCAGTTGAGGCTGAATCGAGGAACTCTAGTGTGACACAAGGGAGCAATGATGGATTGATGAATCCGTTTGCTCCTTCATTCATCCTTGACAATGTCCGAGACCCTCAGGAAACATACATTGCTTGCTGTAGCAAGAAAACTTCACAGGATACCCCATGTACACTTGACAATGCCAACAAAGAAAAAACCAGACAAATAGCATCAATGGAAGTCAATATGGAAGAAAAGGATCCAGGAGGGGAAGAGAGAGATGTCCCTGCCAATAAGCTTGACAATAATGTACTGCCAAACAGCAAAGAACTCTGTGATCCTGCCATGGAATTTGCTGCTGTTTCTTCACCATTCAAGGAGAATCACAATCCAGACACGGGAAGCAGTCATGATACTGATCTTAATAAAACACCACAACAAAAATCAAGGAGAAGAAAGCACCGTCCCAAGGTCATCAAAGAAGACAAACCCAAAAGAACTCGGAAGCCTGTTACCCCAAAGCCTGTTCAATCAAAAGAAAACCCACCTGTCAAGAGGAAATATGTGAGAAAGAAGGGATTGAACAAGACTTCTACTCCTCCAACAGAAGAGACTAGGGAATTGACTAAAGAAATGTCTGGATCAGTCAAAAGGTCCTTAAATTTTGACATAGGAACAATAGATGAAAGTTCTGCTGGCATAGAAAATACAACTGCGCTATTGGGAAAAGAAAATGGTGTTCTCGTACAAGAAACAAATGTAGGTCTTGCATTTGATCTAAACACTTCCATGAAGCAGGCATCAAACAGTTGCATGCCACTACCAGAAGACACACAAGCCCTGAATACATCTCCTTCAAGAAGAAAAAGCTCTGGGACAAAGCCAGAGGAAAACCCACCTCCCAAGAGGAAGTATACAAGAAATAAAAGAGTGAGTAAGACATCTCCAACAGAAGTGACTGGAGAAATGACTAAAGAAAATATGCCTGAATCCGCCCAAATGTCATGTACAGGGTCTGTAAATTTTGATGAAAGAGCGAGAGATCAAAGTTATGCAGTCCAAGGGAATCCAATTGTACATCCGGGCAGTGAAATTGGTGTAGTCATGCAGGATATAAATGTGGGATTTGCCTATGATCTAAACACTGCCATGAAGCATGCATCAAACAGTTACATGTCATTACCAGAAGACACACAAGCCCGAAATACATCTTCAAGAAGAAAAAGCTCTGGGACAAAGCCAGAGGAAAACCCACCTCCCAAGAGGAAGTATGTGAGAAGGCAAGGAGTGAACAAGACTTCTGCTCCTCCAATAGAAGTGCCTGGAGAATTAACTAAAGAAACAATGCCTGCATCTGCCCAAACATCATGCACAGGGTCCATAAATTTTGATGAAAGAGCAAGAACTGGACATCCAGGCAGTGAAATTGGTGTAGTCATGAAGGAAATGAACGCAGGCCTTGCCTATGATTTAAACACTTCCATGAAGCAGGCATTAAATGAAGATATGACATTACCTAAGGACGCACAAGCCCCAAATTCATCTTCAAAAATCAATCTCCCTGGCACAAAGACAAAAGAAAACCTGACTGGCAAGAGGAAGAATGCGAGGAAAAAAGGATTGAATCCGTCTCCTATTCCTCCAACAGAAATGACAGAATTGACTGAAGCAATGATGCTTGAATCTAACAACATGTCGTGGAGAAGATCCTTAAATTTTGATATGGGAACTGGAGATGGAAGTTATGTAGGCAGAGAAAATTTAGATTTGCACATTGGAAAGGAAAATATGGTGTTAGAGGAAACAGAAGTAGGTCTCACCTATAATCAAGACACTTGGATGAATGAGGCACTAAATAATTGCATGCCATTACCTGAGGAAACACAACACCCAAGTACGTCTATTTCAAAATGCATTCCTCTTGGGGCAAAGCTGAATGCCAACTCTGTAGAGAACAAAAACAAAAAAGGCCAGGCAACTGCTCAGGATGGAAACATCAGGAATAGTCAAAGTTCAACAATAAGGTTACAAATGGTTGGTTCAAAGAGAAAACATTCTGGTACCTTTAATCGTGCAGATGACAGCAGCATGAACCTGATTGGAGCACACTATAATGGACTGCCCTCATACCAAACTAGCTTTTGCCTTCAGTTTCCAAACATACAGAAGAAAAGGAGAACTGAAAAGGGGAAAACTTTCAACGCTTACGATACATCTGCGACTGCAACAAAAGAAGTCCACCAGACATGCCCTCAGGAAGATGCTCTAGGACATCCGTGTGCATCAAGCTCCAGCTGCTGGATTTATGGTTCTGGATATAATACAGTTGGAGTCCCAGGCACAAGTGGATTGACAGAAAATTTTATTGATAATACTCAAACATTCGACGAGTTCATCTTGTCATTGAAAAGGCTGGCAGAAAGATCTCAAACCTCTACTTGTGATCGTGGTTCTCTAACCAGAATTAGAAACTGTGATAATGAACCAAATTACACTGCAAAACAAGTAGGCGTCTCTGGCAGAGTAACATTTGGGGATGCAAAAAGACCACAAACATGCATTGGTGCTTTAGTTGCAGAGACACGCACACCACCCACAAAAAAAAGGCGGAATAAAAAGAAAAGTGTTCTTTCCAATTCAGCACATTCTACCACAAATGAGATGCTACAGCACCATAATTTTACATTGGGAAATTACCCTCTGCCAATGGGAAAGTCGTCAGACATTGTTCCTGAAGTACTATGGAACACCATGAACAATATTGATGCATTAGCATTGCAATTTAGACGACTAAACATAAACACACAAGCCAGAGACCTTGCATTTCATGAGCAGAATGCACTTGTCCCTTATGGAGATGGGGTCATCGTTCCCTTTCACATCAAGAAACAGCATCTACGACCAAAGGTTGACCTTGATGATGAGACTGATAGAGTGTGGAAGCTTTTGATGTTAGATATAAACAGTCATGGGATTGATGGAACAGATGAAGATAAGGCCAAGTGGTGGGAAGAAGAACGAAATGTGTTCCGAGGACGAGCAGACTCTTTTATTGCACGAATGCATCTTGTACAAGGAGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTAGTTGGAGTTTTCCTCACCCAAAATGTCTCTGACCATCTTTCCAGCTCTGCATTCATGTCCCTTGCTGCTCGATTTCCCAAAAATTCAAGCAGCATGTGCAAAACACACCATGCGGAAGACACAAGGCTGGTAGTCAACGAACCACAGGTGCATATAGTGGAACCAGAAGAGAGCACAGAATGGGATGTAAAATTATTGAATCAATCTGTTTATGACCAGAGTTCTCCGACAATAGATATAGTTGAGCATTCTGGAGAAAAAGAAGCCATCAACAGCAATGGATCCTGTGGAACTACCAGCAGTGTAATTAGCTTGACAGATGAATCAAACTCTAGATTGTCAGAATTACCTCAAAGGAATATTAAGGAACACTGTAGTCCAATGAGGAGTGGACAACTTAGTGCTACAATTGAGGGAGAAGAAAAATCATGTTATGATGGTGATAGGAAAGAGTTAAATGACATAGTTTCATCCCAAGGCTCTGTCATTTCATCTCAAATATCTGGAGATTTTTCAAACGATCAAAATCCTGAGAAAATAGGATCATGCTCAGATAGCAACTCAGAAGTAGAAGTTCTGTCCAGCACAGCAAAGTACAACCATTTCGATAGCAACACTTCCTTCAGCAAACTCCTCGAAATGGTTAGTTCAACCAAGTTTTATGAAGATAACAGTCAAAAAAGCAAATCAATTGAGAACTCACAAGATGCATGTGATCAACCTATACACAGGCAGCATAACAACCCAATAGAGAGCTTGAAAAAACCAAGTGTTACTCAAGGCTCTTCAGAAGCATCCATCACCCTATCCCATGAATATACTTTGAAACTCGCCCCCAACTCAGGAATGCTTGAAGTTAACTGCTTTGATCCTTTCAAAACAGAAGCCTCAACAGGTGACTTCTTGAAGAAAAAGGATGAAAATGGCATGAACAGATCTAGTTTTCAAACAACAGAACCTGCAGGCCAAGTTGCAATTACCCATTCTCAAAGTATTGTATCTCAAGTCCATCCTCAGGAACAAAGCAATCACCAGCAGCAAAGCTTTTTCAACATTTCTGGACAAACTCAAGATCTTACGCAGAAAGAAAGGGGGTCAGATCTTGGTGAGCACAAAAATGCCATGAGGAACGGAACCAATGAGATAAGTTCTGCCCCAATAAAATTTAAGAGCAAGGAACAAGGAAAAGAAAAAAAGGATGATTTTAACTGGGATAGTTTAAGAATTGAAGCACAAGCTAAAGCTGGGACAAGAGAAAAGACAGAAAACACCATGGATTCTTTGGACTGGGATGCTGTGAGATGTGCAGATGTCAGTGAAATCGCTGAGACCATCAAAGAACGGGGCATGAACAACAGGCTTGCAGAACGTATTAAGAATTTCCTGAATCGACTGGTTGAAGAACATGAACGCATTGACCTTGAATGGCTGAGAGACGTTCCACCTGACAAAGCAAAAGAATACTTGCTCAGCATAAGAGGATTGGGATTGAAAAGTGTGGAATGCGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCGGTAGACACAAATGTTGGACGTATAGCAGTAAGACTGGGATGGGTCCCTCTGCAGCCACTACCTGAGTCACTGCAGTTACATCTCCTAGAATTGTACCCGGTGTTGGAGTCGATACAAAAATATCTCTGGCCTCGACTGTGCAAGCTAGATCAAAAAACACTATATGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGCCCAATGAGAGGAGAATGTAGACACTTTGCTAGTGCATTTGCCAGTGCAAGGCTTGCACTGCCTGAACCAGAGCAGAAGAGTATAGTTAGCACAGCTGGAAATAGTGTGATTGACCAGAACCCATCTGAAATTATCAGTCAGTTGCACTTGCCTCCCCCTGAGAACACAGCCCAAGCAGAAGAAATTCAACTAACAGAACTGAGCAGACAATTGGAACCAAAATCTGAAATAAATATTTGCCAACCTATCATTGAAGAGCCAACAACTCCAGAACCAGAATGCTCGCAAGTATCACAAACTGATATAGAGGATGCTTTCTATGAGGATTCATGTGAAATTCCAACCATCAAGCTTAACATAGAAGAGTTTACTCTGAATTTACAAAATTACATGCATGAAAATATGGAACTTCAAGAAGGTGAAATGTCAAAAGCATTGGTTGCTTTGAATCCAGAAGCTGCTTCCATTCCTATGCCCAAGCTAAAGAATGTGAGCCGATTACGAACAGAGCACTGTGTTTATGAACTCCCAGATACACATCCTCTTCTGCAAGGGTGGGACACACGAGAGCCTGATGATCCAGGCAAATACCTTCTTGCTATATGGACTCCAGGTGAGACAGCAAATTCTATACAGCCACCAGAAAGCAAATGCAGCTCTCAAGAAGAATGTGGCCAACTCTGTAATGAGAAGGAATGTTTCTCGTGCAACAGTTTTCGTGAAGCAAATTCACAGATAGTTAGAGGGACACTCCTGATACCATGTCGAACAGCTATGCGGGGGAGCTTTCCACTGAATGGCACCTATTTCCAAGTCAATGAGGTATTTGCTGACCATGACTCAAGTCTTAACCCAATTAGTGTGCCCCGAAGTTGGATCTGGAACCTCAATAGGCGAACAGTATATTTTGGAACCTCTGTACCAACAATATTTAAAGGTTTAACAACACAAGAAATTCAACAATGCTTTTGGAGAGGGTATGTCTGTGTGCGGGGGTTTGACAGGGAAACACGAGCACCCCGTCCTCTGATGGCTAGACTACATTTCCCAGCTAGCAAGTTGCCCAAGACCAAAGAGAAGACAAAAAAGGAGTCGAGTTCGGCAAAATCACAAGGATTGAAACCAAATCCAGAACAGCCGGAATTGATTTCCAACAGTAGCAACCTTCAACAGACGGGAAAAGACTGA 6360 0.4215 MEVGEMDRKEPQIEVPWSPGTPVKPVPLKPVPIYMPGERNQMGHHANGAVACAEFSLGQEKICGSGDGSNVADDSGKTCEQTASDAVSGYSKLGFCEQLFAVEAESRNSSVTQGSNDGLMNPFAPSFILDNVRDPQETYIACCSKKTSQDTPCTLDNANKEKTRQIASMEVNMEEKDPGGEERDVPANKLDNNVLPNSKELCDPAMEFAAVSSPFKENHNPDTGSSHDTDLNKTPQQKSRRRKHRPKVIKEDKPKRTRKPVTPKPVQSKENPPVKRKYVRKKGLNKTSTPPTEETRELTKEMSGSVKRSLNFDIGTIDESSAGIENTTALLGKENGVLVQETNVGLAFDLNTSMKQASNSCMPLPEDTQALNTSPSRRKSSGTKPEENPPPKRKYTRNKRVSKTSPTEVTGEMTKENMPESAQMSCTGSVNFDERARDQSYAVQGNPIVHPGSEIGVVMQDINVGFAYDLNTAMKHASNSYMSLPEDTQARNTSSRRKSSGTKPEENPPPKRKYVRRQGVNKTSAPPIEVPGELTKETMPASAQTSCTGSINFDERARTGHPGSEIGVVMKEMNAGLAYDLNTSMKQALNEDMTLPKDAQAPNSSSKINLPGTKTKENLTGKRKNARKKGLNPSPIPPTEMTELTEAMMLESNNMSWRRSLNFDMGTGDGSYVGRENLDLHIGKENMVLEETEVGLTYNQDTWMNEALNNCMPLPEETQHPSTSISKCIPLGAKLNANSVENKNKKGQATAQDGNIRNSQSSTIRLQMVGSKRKHSGTFNRADDSSMNLIGAHYNGLPSYQTSFCLQFPNIQKKRRTEKGKTFNAYDTSATATKEVHQTCPQEDALGHPCASSSSCWIYGSGYNTVGVPGTSGLTENFIDNTQTFDEFILSLKRLAERSQTSTCDRGSLTRIRNCDNEPNYTAKQVGVSGRVTFGDAKRPQTCIGALVAETRTPPTKKRRNKKKSVLSNSAHSTTNEMLQHHNFTLGNYPLPMGKSSDIVPEVLWNTMNNIDALALQFRRLNINTQARDLAFHEQNALVPYGDGVIVPFHIKKQHLRPKVDLDDETDRVWKLLMLDINSHGIDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPKNSSSMCKTHHAEDTRLVVNEPQVHIVEPEESTEWDVKLLNQSVYDQSSPTIDIVEHSGEKEAINSNGSCGTTSSVISLTDESNSRLSELPQRNIKEHCSPMRSGQLSATIEGEEKSCYDGDRKELNDIVSSQGSVISSQISGDFSNDQNPEKIGSCSDSNSEVEVLSSTAKYNHFDSNTSFSKLLEMVSSTKFYEDNSQKSKSIENSQDACDQPIHRQHNNPIESLKKPSVTQGSSEASITLSHEYTLKLAPNSGMLEVNCFDPFKTEASTGDFLKKKDENGMNRSSFQTTEPAGQVAITHSQSIVSQVHPQEQSNHQQQSFFNISGQTQDLTQKERGSDLGEHKNAMRNGTNEISSAPIKFKSKEQGKEKKDDFNWDSLRIEAQAKAGTREKTENTMDSLDWDAVRCADVSEIAETIKERGMNNRLAERIKNFLNRLVEEHERIDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPEPEQKSIVSTAGNSVIDQNPSEIISQLHLPPPENTAQAEEIQLTELSRQLEPKSEINICQPIIEEPTTPEPECSQVSQTDIEDAFYEDSCEIPTIKLNIEEFTLNLQNYMHENMELQEGEMSKALVALNPEAASIPMPKLKNVSRLRTEHCVYELPDTHPLLQGWDTREPDDPGKYLLAIWTPGETANSIQPPESKCSSQEECGQLCNEKECFSCNSFREANSQIVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPISVPRSWIWNLNRRTVYFGTSVPTIFKGLTTQEIQQCFWRGYVCVRGFDRETRAPRPLMARLHFPASKLPKTKEKTKKESSSAKSQGLKPNPEQPELISNSSNLQQTGKD 2119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03146 2119 SMART ccc3 1713 1733 IPR003651 GO:0051539
Pumo3g03146 2119 SUPERFAMILY DNA-glycosylase 1102 1735 IPR011257 GO:0003824|GO:0006281
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 1354 1396 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 357 426 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 498 513 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 2068 2119 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 1296 1317 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 1488 1533 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 169 188 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 953 974 - -
Pumo3g03146 2119 CDD ENDO3c 1560 1678 IPR003265 GO:0006284
Pumo3g03146 2119 Gene3D Hypothetical protein; domain 2 1557 1641 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 2092 2119 - -
Pumo3g03146 2119 SMART endo3end 1546 1712 IPR003265 GO:0006284
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 237 252 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 596 639 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 214 304 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 380 394 - -
Pumo3g03146 2119 Pfam RRM in Demeter 1973 2073 IPR028925 -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 357 379 - -
Pumo3g03146 2119 FunFam DNA glycosylase/AP lyase ROS1 1634 1742 - -
Pumo3g03146 2119 Gene3D - 1642 1730 IPR023170 -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 1 21 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 2076 2091 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 481 546 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 402 426 - -
Pumo3g03146 2119 Pfam Permuted single zf-CXXC unit 1938 1970 IPR028924 -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 169 193 - -
Pumo3g03146 2119 Coils Coil 1582 1602 - -
Pumo3g03146 2119 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 141 381 IPR044811 GO:0019104|GO:0035514|GO:0080111
Pumo3g03146 2119 Coils Coil 1844 1864 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 597 616 - -
Pumo3g03146 2119 MobiDBLite consensus disorder prediction 481 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03146 Pumo-Chr3 57886625 57899010 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03146 - - gmx:100806794 3082.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03146 3 57886625 57899010 Pumo3g03146 3 57886625 57899010 ECH
Pumo5g03141 5 80194309 80204487 Pumo3g03146 3 57886625 57899010 PCT