Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02950 ATGCATGGACATATGGTGCTGTTGACCCCAACAGTGGGACAGCTGCCCTACTTGACATTGCTCGCAGATATTCTATTCTATTGCGTTTGGGGTGGGACTCCACGGAGGACCATCATTCTATGCAGTTGGGATGCAGAGGAATTTGGAATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTGTTAATCTTCGTTCCAAAGCTGTAGCATACCTTAATGTAGACTGTGCTGTTCAAGGGCCTGGTTTCTTTGCTGGCTCAACTCCTCAGCTAGACGATCTCCTTCTCGAGGTCATAAAACAGGTCAAGGATCCTGACTCCGAGGGTACAACGATATATGAGAATTGGGAAGCTGCTGGTGGAAACTCTAATATTCAACGGCTCGGTAGGGTAGATTCTGATTTTGCTCCATTTGTGCAACATGCAGGGGTTCCATCTATTGATGTATATTATGGAAAAGATTATCCTGTCTATCACACTGCTTTCGATTCCTATAACTGGATGACAAAGTCTGGAGATCCATTCTTTCAGCGCCATGTAGCTGTTACTGGAATTTGGGGGCTTATAGCCCTTCGCCTTGCTGATGATTCCATTATACCTTTCAATTATCTTTCTTATGCGGATCAGTTACAGGTGTACAATAACATATTGAGCAACTTGTTAGACAAGCGGATTTCTCTACATCCACTAAATACTTCGATTCAAGAATTTGCTTCTGCTGCCAAAGAAGCTAATGATGAATCAAAGAAACTGAGATTGCAAGAAACTTCAGATCGTTCTATAGATATGAAAATGCGAGCATTGAATGATAGACTAATGCTTGCGGAAAAAGGCTTCTTGGACGTTGATGGGCTTCGAGGAAGGCAATGGTTCAAGCATCTTGTTTTTGGGCCTCCAAGCGACCATGAAAGCAAGTTGGATTTCTTCCCTGGAATCGCTGACTCTATGTCTGGGATGGTTATAATGAGTGAAAAAGAAAGGCTGGCTGCAATTCAGCATGAGATCTGGAGGGTTGCCAGGGCCATTCAAAGAGCTGCTTCAGCACTAAGAGGGGATTTAGCTTAA 1065 0.4366 MHGHMVLLTPTVGQLPYLTLLADILFYCVWGGTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLRSKAVAYLNVDCAVQGPGFFAGSTPQLDDLLLEVIKQVKDPDSEGTTIYENWEAAGGNSNIQRLGRVDSDFAPFVQHAGVPSIDVYYGKDYPVYHTAFDSYNWMTKSGDPFFQRHVAVTGIWGLIALRLADDSIIPFNYLSYADQLQVYNNILSNLLDKRISLHPLNTSIQEFASAAKEANDESKKLRLQETSDRSIDMKMRALNDRLMLAEKGFLDVDGLRGRQWFKHLVFGPPSDHESKLDFFPGIADSMSGMVIMSEKERLAAIQHEIWRVARAIQRAASALRGDLA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02950 354 FunFam N-acetylated alpha-linked acidic dipeptidase like 1 2 200 - -
Pumo3g02950 354 Pfam Peptidase family M28 31 168 IPR007484 -
Pumo3g02950 354 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 33 351 IPR039373 -
Pumo3g02950 354 Coils Coil 234 254 - -
Pumo3g02950 354 Pfam Transferrin receptor-like dimerisation domain 225 349 IPR007365 -
Pumo3g02950 354 SUPERFAMILY Zn-dependent exopeptidases 30 197 - -
Pumo3g02950 354 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 201 352 - -
Pumo3g02950 354 Gene3D - 204 354 IPR036757 -
Pumo3g02950 354 SUPERFAMILY Transferrin receptor-like dimerisation domain 200 351 IPR036757 -
Pumo3g02950 354 Gene3D Zn peptidases 28 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02950 Pumo-Chr3 52638515 52645870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02950 K01301 - gmx:100817485 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02950 3 52638515 52645870 Pumo3g02950 3 52638515 52645870 ECH
Pumo5g03308 5 82258791 82263880 Pumo3g02950 3 52638515 52645870 PCT