Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02949 ATGGAGAATCAGGACACAAGAGATAAACCGTTTCAGAAGTTTAGATGGACAATTAGGAATTTCTCTAAATTGGACTGCAAACAACTGTACTCAGGGATATTTTCCACGGATGACCATAAATGGAGGATTCTTATCTATCCAAAGGGGAACAAAGTGGACTTCTTGTCTATTTATTTGGATGCTGTTGCTTACAATTTGCCTTCTATCTGGACCAAATTTGCAAATTTCAAGTTTGCTTTAATTAATCAGGTCAACAACAAAATGACTAAAATAGAAGAAACTAGTCACCAGTTCAATACAACGGAGTCTGATTGGGGTTACAAAACATTCATACCTTTAAATGAACTTTGCGATCCTTCCAAGGGGTTTATTGTGAATGATACTTGTATAATTGAAATTGAGATTTTGGTCAGCAAGTCAGAACATATGAATCTGAATCATGTAGATCAACCAGTTATCAAGATTGATGACAAGATTGATGACAAGCCTATTGAGTTAGTGGATGAGTTAGTGGATTTCAAGGGTTTAGGGAAAATAGAAAAAGCTTTTGTTCCACTACTAGAAGAAGTGTGTTCACAGCATTCTTCTCTGATTGATAGTCAGCGGAAAGGAACTAGTATGTTTATTGAATATGCATTCAGAGCTTTGGGTCGAGTTTTACATTTTCTCAAGAATAAAAAGGTAAAAGACATGGATGATGATGCTTGTAATCATCTCCAAATTTTATGGGACGAACTTGAGCCATTTAGATTTGATTTGACCTGGTTGGAACCCCATGTTCAATCTGCCTTGCATATGAAAAATTATATGGAGAAAACTCTTGAGCTGAAAAAGATGAAGGAGAATGTGGCTGCTTTGGAGATGGAAAAAGAAAGTTTGAAAGCAAAGATGACAGAAATAGAGGTAGAACTTAAAATAGCAAGAAGAGACTTGGTGAAAGCAGAAGAAGGCTTTGAAGAGCGCAATTTGGATGCTGAACTAGGATATGGAGCACCATTGAAGAATTCAGTTTCTGTGTAG 1020 0.3627 MENQDTRDKPFQKFRWTIRNFSKLDCKQLYSGIFSTDDHKWRILIYPKGNKVDFLSIYLDAVAYNLPSIWTKFANFKFALINQVNNKMTKIEETSHQFNTTESDWGYKTFIPLNELCDPSKGFIVNDTCIIEIEILVSKSEHMNLNHVDQPVIKIDDKIDDKPIELVDELVDFKGLGKIEKAFVPLLEEVCSQHSSLIDSQRKGTSMFIEYAFRALGRVLHFLKNKKVKDMDDDACNHLQILWDELEPFRFDLTWLEPHVQSALHMKNYMEKTLELKKMKENVAALEMEKESLKAKMTEIEVELKIARRDLVKAEEGFEERNLDAELGYGAPLKNSVSV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02949 339 ProSiteProfiles MATH/TRAF domain profile. 11 135 IPR002083 GO:0005515
Pumo3g02949 339 Coils Coil 269 317 - -
Pumo3g02949 339 CDD MATH 13 135 IPR002083 GO:0005515
Pumo3g02949 339 Pfam MATH domain 18 136 IPR002083 GO:0005515
Pumo3g02949 339 SMART math_3 13 116 IPR002083 GO:0005515
Pumo3g02949 339 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 313 - -
Pumo3g02949 339 SUPERFAMILY TRAF domain-like 13 139 - -
Pumo3g02949 339 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 155 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02949 Pumo-Chr3 52583448 52585734 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02949 - - gmx:121172949 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02949 3 52583448 52585734 Pumo3g02949 3 52583448 52585734 ECH
Pumo3g02949 3 52583448 52585734 Pumo9g02146 9 52730023 52743546 ECH