Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02947 ATGGAGAATCAGACCACAAAGGATAAGATGTTTGAGAAGTTTACATGGACGATAAGGGACTTCTCTAAATTGGACTCCAAGGAGCTATACTCTGAGAATTTTTCCCTTGATGACCATACATGGCGGATTCTTATCTTTCCAAAGGGAAACAATGTGGATTACTTGTCAATTTATTTAGATGCTGGTGGGAATCTTGCTAATTTGCCTGATAGCTGGAACAAATTTACAAATTTCAAGTTGACTTTAATTAATCAGATCAACGACAAAATGACTAAAACAAGAGAAACTGAACACCAATTCAATGCAAAAGAGAGAGACTGGGGTTTCACAGGATTCATACCTTTAGATGAACTTTGTGACTCTAGCAATGGGTTTATTGTGAATGATACTTGTATAATTGAAGTTGAGATTTTGGTTAGCAAGTTAAAACACAAGAATCAAGTAGATCAACCGGTTAACAAGATTAATGATAAGCCTACCGAACACACTGATCATAATCCTTTACCTAAGGAAATGTTCACAACAATTGGTGAGCTAGTGGATTTTAGGGGTTTAGGGAAAATAGAACAAGATTTTGTTCCACTATTAGAAGAAGTATGTTCACAACATCCTTCACTTATTAACAGTCAAAAGAAGAGAACTCGTAGGTTTGTTGAATGGGCATTCACAGCTTTAGGTCGAGTTCTACATTTTCTTAAGAATAAAAAGGTGAAAGATATGGATGACGATGCTTGTAATCATCTCCAAATTTTATGGGAGGAACTTGAGACATTTAGATTTGATTTGACCTGGTTGGAACCCCATGTTCAATCAGCCTTGGGTATGAAAAATTATATGGAGAGAGCTACTCAAGTGGAAAAGATGAAGGAGAATGTGTATGCGTTAGAGATGGAAACAAAGATGTTGAAGGCAAAGATGATAGAAGCAAAGGTAAATCTTGAAATAACAAGAAGAGACTTGGCGAAAGCAATTGAAGGCTTTGAAGAGTGCAATTTGGATGATGAACTGGGATATGGAGGACAATAG 1026 0.3635 MENQTTKDKMFEKFTWTIRDFSKLDSKELYSENFSLDDHTWRILIFPKGNNVDYLSIYLDAGGNLANLPDSWNKFTNFKLTLINQINDKMTKTRETEHQFNAKERDWGFTGFIPLDELCDSSNGFIVNDTCIIEVEILVSKLKHKNQVDQPVNKINDKPTEHTDHNPLPKEMFTTIGELVDFRGLGKIEQDFVPLLEEVCSQHPSLINSQKKRTRRFVEWAFTALGRVLHFLKNKKVKDMDDDACNHLQILWEELETFRFDLTWLEPHVQSALGMKNYMERATQVEKMKENVYALEMETKMLKAKMIEAKVNLEITRRDLAKAIEGFEECNLDDELGYGGQ 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02947 341 SUPERFAMILY TRAF domain-like 13 141 - -
Pumo3g02947 341 SMART math_3 13 118 IPR002083 GO:0005515
Pumo3g02947 341 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 314 - -
Pumo3g02947 341 CDD MATH 13 137 IPR002083 GO:0005515
Pumo3g02947 341 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 154 IPR008974 GO:0005515
Pumo3g02947 341 Pfam MATH domain 18 138 IPR002083 GO:0005515
Pumo3g02947 341 ProSiteProfiles MATH/TRAF domain profile. 11 137 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02947 Pumo-Chr3 52534580 52537902 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02947 - - gmx:121172949 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02947 3 52534580 52537902 Pumo5g03311 5 82281333 82284123 PCT