Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02376 ATGCTCCGAACCCTTCAGTTGGTTCTGCAGATTGAAGACACAGAATCGTGTAAAGAAGCACACCCTAATGCTTTAAATCCACAGTCCTGGCTCCAAGTTGAAAGAGGGAAGCTTCCCAAGTTGTCATCACAGACCTCCTCTTCATCAATAGAATCTCTAATCAAGGTCCCACAGCCGCCTATACTCCCATTCTTCAAACCTGTTGATTATGTGGAAATTTTAGCTCAAATCCATGAAGAACTTGAGTCATGTCCTCCGCAGGAGCAGTCAAATCTGTTTTTGTTACAATACCAGGTCTTTAGGGGCCTGGGGGATGTTAAACTGATGCGTAGAAGCCTCCGGTCAGCTTGGCAGAGAGCAAACACTGTTCGTGAGAAGATTATATTTGGGGCATGGTTGAAGTATGAGAAGCAAGGGGAAGAATTAGTAGCTCAGTTGCTCACAAATTGTGGTAAATGTGAAAAGGAATTTGGACCCATAGATGTAGAATCTCATATTCCTTTTGATGAAAATGTAAGATCCCAGGATGGAGCTTCGGTGAATGGGAACAACGCTTCACAATATGTTATCTTTACAATCGGAGGTGAGAAGATAGTCTGTGATAGACAAAAGATTTCTGAACTTTCAGCACCATTTCATGCAATGCTAAAGGGGTGTTTCAGGGAATCACTTTCTGAGACTATAGATTTGTCTGAAAACAATATCTCTCCTTCAGGTATGAGGGCAATAAGTTATTTCAGCTTGACAGGGAGTTTACTTGATGTGCCTCCAAATCTTTTGGTGGAAATATTAGCTTTTGCAAATAAGTATTGTTGCGAAAGACTAAAACAGGCTTGTGGTAGAAGACTTGCATCCTTAGTTTTCTCCAGAGAAGATGCACTGGAACTCATGGAATATGCTGTTGATCAGAATTCATCTGTCCTTGCGGCTTCTTGTTTACAAGTTCTTTTACGCGATATTCCCAACTGCTTGAGAGACAATCGGGTTGTGGAGTTATTTATTCATGCTAATAAGCAGCAGTTGGCAGTCATGGTTGGGCCTGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTAATTTCCTGAAACGGTTAGTTGATTTTGCTGAAAATGATAAGCAGAGACTGCTGGCATTTCATCAATTTGGATGTGTAAGACTCTCAAGGAATGAATATGATGAAGCCTATTGTCTTTTTGAGAGGGCTTTAAATGCAGGTCATATTTATTCTGTTGCGGGTTTAGCTAGACTGGACTCTATAAAGGGTGAGAAGCTTTTATCTTATGAGAAGATCAGTTCAGTCATTTCTTCTGATACTCCACTTGGATGGATGTACCAAGAAAGATCACTATATTGTGATGGTGATTTGAGGTGGAAAGACCTTGAGAAAACAACTGAACTTGACCCTACTCTTGTATATCCCTACATGTATAGGACTGCCTCTTTAATGAGGACACAGAATGTTCAAGGTGCACTAACTGAAATCAACCGGATTCTTGGCTTCAAACTTTCATTAGAGTGCTTGGAACTGCGGTTTTTCATCTATCTGGCCCTTGAGGACTACAAAGCAGCTCTCCGAGATGTTCAAGCAATTCTTACCCTGTGTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATCTCAGCTCTGTACACTTGTGCGTGAGCATGTTGAACATTGGACAACAGCAGATTGTTGGGCACGATTATATGACTGTTGGTCTGCCGTTGATGATGTTGAGTCTCTCTCTGTTATCTACCAGATGCTTGAATCTGATGCAGCAAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTCAGGCTAAACTGTCCTGAGGCAGCCATGCGGAGTTTACAGTTAGCTTGGCAACATGCATCAAGTGAGCATGAAAGACTTGTATATGAGGGGTGGATCTTGTATGATACAGGTCATTGTGAGGAAGGGCTCCAAAAAGCTGAAGAGTCTATTAGTATTAAAAGGTCTTTTGAGGCCTACTTCCTGAAGGCCTATGCATTGGCTGACTCTAGTGTAGATTCATCATGTTCTTCAACTGTTATTTCTCTTCTGGAAGATGCCTTGAGGTGTCCTTCTGATAATCTGCGCAAAGGTCAGGCTCTAAACAATCTTGGAAGTGTTTATGTTGATTGTGGGAAATTGGACTTAGCAGAAGATTGCTATATCAAGGCCCTTAAAATCCAGCACACCCGAGCCCATCAGGGTCTTGCTCGTGTTCATTTTCTCAAAAATGATAAGGCTGCTGCTTACAAGGAAATGACCAACCTTATTGAGAAGGCAAGAAACAATGCATCAGCATATGAGAAGAGGTCTGAGTATGGTGATCGTGAACTCACAAAGGCTGATCTGGAGATGGTGACTAGATTAGATCCACTTCGGGTGTATCCTTATAGATATCGAGCAGCAGTTTTGATGGACAACCATAAGGAAGAGGAAGCCATTGCTGAACTGTCTAGAGCAATTGCATTTAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTCCATGAACACAAGGGGGATGTTTTAGGTGCACTAAGAGACTGTCGTGCTGCGCTCTCGCTGGATCCAAACCATCAAAAAATGTTGGAACTTCACTGTCGTGTTAATAGCCTCGAGCCATGA 2685 0.4197 MLRTLQLVLQIEDTESCKEAHPNALNPQSWLQVERGKLPKLSSQTSSSSIESLIKVPQPPILPFFKPVDYVEILAQIHEELESCPPQEQSNLFLLQYQVFRGLGDVKLMRRSLRSAWQRANTVREKIIFGAWLKYEKQGEELVAQLLTNCGKCEKEFGPIDVESHIPFDENVRSQDGASVNGNNASQYVIFTIGGEKIVCDRQKISELSAPFHAMLKGCFRESLSETIDLSENNISPSGMRAISYFSLTGSLLDVPPNLLVEILAFANKYCCERLKQACGRRLASLVFSREDALELMEYAVDQNSSVLAASCLQVLLRDIPNCLRDNRVVELFIHANKQQLAVMVGPGIFALFCFLSEVSMNLNSSSDTTANFLKRLVDFAENDKQRLLAFHQFGCVRLSRNEYDEAYCLFERALNAGHIYSVAGLARLDSIKGEKLLSYEKISSVISSDTPLGWMYQERSLYCDGDLRWKDLEKTTELDPTLVYPYMYRTASLMRTQNVQGALTEINRILGFKLSLECLELRFFIYLALEDYKAALRDVQAILTLCPSYKMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDVESLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLAWQHASSEHERLVYEGWILYDTGHCEEGLQKAEESISIKRSFEAYFLKAYALADSSVDSSCSSTVISLLEDALRCPSDNLRKGQALNNLGSVYVDCGKLDLAEDCYIKALKIQHTRAHQGLARVHFLKNDKAAAYKEMTNLIEKARNNASAYEKRSEYGDRELTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSLDPNHQKMLELHCRVNSLEP 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02376 894 SUPERFAMILY TPR-like 487 747 IPR011990 GO:0005515
Pumo3g02376 894 SUPERFAMILY TPR-like 379 511 IPR011990 GO:0005515
Pumo3g02376 894 SUPERFAMILY POZ domain 189 284 IPR011333 -
Pumo3g02376 894 Gene3D Potassium Channel Kv1.1; Chain A 183 326 IPR011333 -
Pumo3g02376 894 Gene3D Tetratricopeptide repeat domain 790 891 IPR011990 GO:0005515
Pumo3g02376 894 Gene3D Tetratricopeptide repeat domain 365 554 IPR011990 GO:0005515
Pumo3g02376 894 PANTHER ETO1-RELATED 12 892 IPR044631 GO:0010105
Pumo3g02376 894 Coils Coil 762 789 - -
Pumo3g02376 894 SMART tpr_5 517 550 IPR019734 GO:0005515
Pumo3g02376 894 SMART tpr_5 388 421 IPR019734 GO:0005515
Pumo3g02376 894 SMART tpr_5 846 879 IPR019734 GO:0005515
Pumo3g02376 894 SMART tpr_5 717 750 IPR019734 GO:0005515
Pumo3g02376 894 SMART BTB_4 187 287 IPR000210 GO:0005515
Pumo3g02376 894 Gene3D Tetratricopeptide repeat domain 604 779 IPR011990 GO:0005515
Pumo3g02376 894 ProSiteProfiles TPR repeat profile. 717 750 IPR019734 GO:0005515
Pumo3g02376 894 SUPERFAMILY TPR-like 701 892 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02376 Pumo-Chr3 36080167 36085316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02376 - - gmx:100785039 1632.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02792 5 74916902 74930145 Pumo3g02376 3 36080167 36085316 PCT