Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02361 ATGGCTTTTAGAGGGTTTGTCTTGTGTTTAGTTGCGGTCCTGGTGGCCACTATGTGGACTCAAAATGCAGCCCAATCGGGTTGCACCAGTACACTAACTAGCTTGAGCCCTTGTCTGAACTACATAATGGGAAGTTCATCAACCCCATCAGCTTCATGTTGCTCACAGCTCTCAAGCGTAGTCCAATCTTCACCACAGTGTCTTTGCTCCGTGCTCAATGGTGGGGGTTCCTCTTTTGGAATTACCATAAATCAAACTCTTGCTCTGTCTCTCCCTGGCGCTTGTAAAGTGCAAACTCCCCCTGTTAGCCAGTGCCAACGTGGCAATGGACCAACATCTCCTTCGACTGCTCCAGTTGTTTCTCCTTCTGGTTCTTCAGCTGAATCACCTCAAGGCTCAATTACACCTTCTGCTTCAGACTTTCCCTCAGGTGGCAATGGACCAACATCTCCTTCGACTGCTTCAGTTGGTTCTCCTTCTGGTTCTTCAGTTGAATCACCTCAAGGCTCAATTACACCTTCTGCTTCAGACTTTCCCTCAGGTGCAGGATCTAAAACTGTGCCATCATCAGACAGTGGTTCATCTGATGGAAGCGCTATTAAAGTCCCCTCCAACTTGGTGCTCTATCTTCTTGCCATTGTGTCTTGTGTCTTAACCTTCACCAAGTTCTGA 672 0.4777 MAFRGFVLCLVAVLVATMWTQNAAQSGCTSTLTSLSPCLNYIMGSSSTPSASCCSQLSSVVQSSPQCLCSVLNGGGSSFGITINQTLALSLPGACKVQTPPVSQCQRGNGPTSPSTAPVVSPSGSSAESPQGSITPSASDFPSGGNGPTSPSTASVGSPSGSSVESPQGSITPSASDFPSGAGSKTVPSSDSGSSDGSAIKVPSNLVLYLLAIVSCVLTFTKF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02361 223 MobiDBLite consensus disorder prediction 100 198 - -
Pumo3g02361 223 Gene3D - 25 105 IPR036312 -
Pumo3g02361 223 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 25 104 - -
Pumo3g02361 223 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Pumo3g02361 223 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869|GO:0008289
Pumo3g02361 223 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Pumo3g02361 223 Pfam Probable lipid transfer 12 105 IPR016140 -
Pumo3g02361 223 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 106 IPR036312 -
Pumo3g02361 223 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 159 IPR043325 -
Pumo3g02361 223 SMART aai_6 28 105 IPR016140 -
Pumo3g02361 223 CDD AAI_LTSS 35 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02361 Pumo-Chr3 35905214 35906710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02361 4 214 Acyl Lipid Metabolism Gene Families AT2G48130 38.498 5.93e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02361 - - gmx:100306151 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02361 3 35905214 35906710 Pumo3g02361 3 35905214 35906710 ECH
Pumo3g02361 3 35905214 35906710 Pumo5g02780 5 74711766 74713725 PCT