Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02295 ATGGCGAAGTGCATCACTGCTTCCTATGCATTGCTTGTGTTTCTCTTCTGCTTTCTACAAGTGGAGGCTATTTTGGACCCTGCTGATTTCCTCGCTCTGCAAAACATTCGTAAAGCCTTGGAAGACATGCCTGGTTCCGATTTCTTTTCCTCTTGGGATTTCACCGCGGACCCATGCAACTTCGCCGGCGTTTACTGCGATTCCGACAAGGTCATCGCGCTCAACCTCGGCGACCCCAGGGCTGGCTCCCCCGGCCTCACCGGCCGCCTCGACCCCGCCGTAGGCAAGCTCTCCACGCTCGCCGAGTTCACCGTCGTCCCCGGCCGGATATACGGGCGTCTCCCGGAATCCCTCTCCGATTTGAAGAACCTGAGGTTCCTCGGCGTCAACCGCAACTTCATCTCCGGCGAAATTCCGACGAAGCTGGGGGAGCTGCGCAACCTCCGTACCATCGATCTCAGCTACAACCAGCTCACCGGACGCATTCCTCCCACGTAG 498 0.5823 MAKCITASYALLVFLFCFLQVEAILDPADFLALQNIRKALEDMPGSDFFSSWDFTADPCNFAGVYCDSDKVIALNLGDPRAGSPGLTGRLDPAVGKLSTLAEFTVVPGRIYGRLPESLSDLKNLRFLGVNRNFISGEIPTKLGELRNLRTIDLSYNQLTGRIPPT 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02295 165 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 12 165 - -
Pumo3g02295 165 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Pumo3g02295 165 SUPERFAMILY L domain-like 27 164 - -
Pumo3g02295 165 Gene3D Ribonuclease Inhibitor 28 165 IPR032675 -
Pumo3g02295 165 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 86 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02295 Pumo-Chr3 35068917 35069414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02295 5 163 Miscellaneous Gene Families AT4G22730 33.129 2.87e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02295 - - gmx:100794756 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02295 3 35068917 35069414 Pumo3g02295 3 35068917 35069414 ECH
Pumo5g02707 5 73634671 73636484 Pumo3g02295 3 35068917 35069414 PCT