Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02267 ATGGGAGTTGTCACTGTTGGAGAATTGAAGCCTAGCATCTCAGGGAAGAGGACCTTTCGTCCAAGTTCAAGCATAAGGCATGCCACTGAATGGCCGATATCTGATGTCTCTAGTGATCTCACCATCGAAGTAGGAGCTTCAAGCTTTGCACTTCACAAGTTTCCTCTTGTTTCTAGGAGTGGAAGGATTCGGAAAATGCTGTTAGAAACAAAAGATTCAAAAGTTTCACGCATAAGTCTCCCCAACCTGCCAGGTGGTGCAGAGGCATTTGAGCTGGCTGCTAAATTCTGCTATGGAATCAATATTGAGTTCACTCTCTCCAATGTTGCCATGCTAAAATGTGTAGCTCATTTTCTAGAAATGACAGAAGATTTCGCAGAGAAAAACTTGGACACACGAGCTGAAGCATATCTAAAGGAGACAGTGCTCCCAAATATATCAAACACAATATCTGTTCTTCACCGTTGTGAAACTCTTGTTCCCATTTCAGAAGAGATTAGCCTTGTCAGCAGACTAATCAATGCAATTGCAAACAATGCATGCAAAGAACAACTCACCACAGGTTTGCAAAAACTGGACCACAACTTCCCTTCTAAAACCACCACAAACATGGAACCGGAAACACCCTCAGAATGGTGGGGAAAATCTCTCAATGTTCTTAGTCTTGATTTCTTCCAAAGAGTTTTGTCTGCAGTGAAGTCGAAGGGACTAAAACAAGACATGATCAGCAAAATTTTGATAAACTATGCACATAATTCTCTTCAAGGGATTGTTAGGGACCACCAAACAGTGAAAGGGTGTTTTCCAGACTTAGAATTGCAGAAGAAACAAAGAGTCATTGTTGAAGCCATTGCTGGCTTACTACCAACTCAATCAAGGAAAAGCCCGGTTCCTATGGCATTTCTCTCGAGTTTGTTGAAAGCTGCAATAGCTGCATCAGCATCCACTTCTTGCAGATCTGATTTGGAGAGAAGGATTGGTCTACAACTTGACCAGGCAATTCTTGAAGATATCCTAATCCCTACAAATTCACATCAAAATATTCATGGCCCTATTTATGACACGGACTCAATTTTGAGGATTTTTTCCAATTTTCTGAACTTGGATGAGGAGGATGAAGAGGATAATAGTCACCTGAGAGATGAAAGTGAAATGGTTTATGACTTTGACAGCCCCGGATCTCCAAAACAAAGCTCAATCCTGAAGGTATCCAAATTGATGGACAACTATCTTGCTGAAGTAGCACTAGACCCAAACTTGTTGCCATCAAAGTTCATATCCCTTGCTGAACTACTTCCAGATCATGCACGTATTGTGAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTCAGAGCGGTACCGGCTGTGCAAAACCATTGATTGTCAGAAAATGTCTCAAGAAGCGTGCAGCCATGCAGCACAGAATGAAAGGCTACCAGTGCAAATGGCAGTTCAGGTTCTATACTTTGAGCAAATCAGGCTTCGCAATGCCATGAATGGAGGGCACAACCAATTCTTCTTTGGAGGAGGACTTAATGGCCAATTCCCTCAACGTTCAGGGAGTGGTGCAGGAAGTGGAGCCATTTCCCCTAGAGACAACTATGCATCAGTGAGAAGGGAGAACCGAGAGCTGAAGCTTGAAGTTGCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGACCACGTTAACATGAAGCAGGAGCTAGTAAGGTCCCACCCTGCCAACAAGCTATTCAAATCATTCACCAAAAAACTAAGCAAACTCAATGCCATATTTCGGATTAACAGTATTAAGCCAAATGGTTCCGAGAGTCGCTTCCCTTTTCCAAAGAGAAGGCGTCACTCAGTTTCATGA 1887 0.4266 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASSFALHKFPLVSRSGRIRKMLLETKDSKVSRISLPNLPGGAEAFELAAKFCYGINIEFTLSNVAMLKCVAHFLEMTEDFAEKNLDTRAEAYLKETVLPNISNTISVLHRCETLVPISEEISLVSRLINAIANNACKEQLTTGLQKLDHNFPSKTTTNMEPETPSEWWGKSLNVLSLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGIVRDHQTVKGCFPDLELQKKQRVIVEAIAGLLPTQSRKSPVPMAFLSSLLKAAIAASASTSCRSDLERRIGLQLDQAILEDILIPTNSHQNIHGPIYDTDSILRIFSNFLNLDEEDEEDNSHLRDESEMVYDFDSPGSPKQSSILKVSKLMDNYLAEVALDPNLLPSKFISLAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKMSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQFFFGGGLNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVNMKQELVRSHPANKLFKSFTKKLSKLNAIFRINSIKPNGSESRFPFPKRRRHSVS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02267 628 SUPERFAMILY POZ domain 22 123 IPR011333 -
Pumo3g02267 628 SMART BTB_4 38 130 IPR000210 GO:0005515
Pumo3g02267 628 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Pumo3g02267 628 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Pumo3g02267 628 Gene3D Potassium Channel Kv1.1; Chain A 24 143 IPR011333 -
Pumo3g02267 628 FunFam BTB/POZ domain-containing protein At1g03010 16 134 - -
Pumo3g02267 628 Pfam NPH3 family 211 479 IPR027356 -
Pumo3g02267 628 PANTHER OS12G0117600 PROTEIN 34 585 IPR043454 -
Pumo3g02267 628 Coils Coil 544 578 - -
Pumo3g02267 628 Pfam BTB/POZ domain 37 138 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02267 Pumo-Chr3 34706433 34711383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02267 1 453 EF-hand Containing Proteins AT2G47860 59.504 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02267 - - gmx:100814622 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02267 3 34706433 34711383 Pumo3g02267 3 34706433 34711383 ECH
Pumo5g03358 5 82707927 82712408 Pumo3g02267 3 34706433 34711383 PCT