Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02084 ATGGCTAAGGCTAACCATACCATGAAGGTGGCCAACTTGTTGCTTCTCGTGACTTTGGCTCTGCTCTTTGCCACCGCTATCTCATCAGATCCTGACCTTCTTCAAGACCTTTGTGTCGCCGACCTTGCCTCAGGTGTGAAAGTGAATGGATTCACCTGCAAAGAAGCATCCAAGGTGAATGCCTCAGATTTCTTCTCCAACATACTAGCCAAACCAGGAGCCACCAACAACACCTTTGGGTCCTTGGTGACTGGAGCCAACGTTCAGAAAGTCCCAGGACTCAACACACTTGGTGTCTCTCTGTCTAGAATTGACTATGCCCCAGGTGGCATAAACCCACCTCACACCCACCCACGTGCCACTGAGGTTGTGTTTGTGCTTGAAGGGCAACTAGACGTGGGGTTCATAACCACAGCCAATGTGCTCATATCAAAGACCATTAACAAGGGTGACATATTTGTGTTCCCAAAAGGGTTGGTTCACTTCCAAAAGAACAATGCCAAGGTCCCTGCTGCTGTGCTTTCAGCCTTCAATAGCCAACTTCCAGGGACACAGTCCATTGCTACCACCTTGTTTGCTGCCACTCCATCTGTTCCAGACCATGTCTTGACCCACACCTTCCAGGTTGGAACCAAAGAGGTTCAGAAAATCAAGTCTAGGCTTGCACCCAAGAAGTAA 678 0.4912 MAKANHTMKVANLLLLVTLALLFATAISSDPDLLQDLCVADLASGVKVNGFTCKEASKVNASDFFSNILAKPGATNNTFGSLVTGANVQKVPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVFVLEGQLDVGFITTANVLISKTINKGDIFVFPKGLVHFQKNNAKVPAAVLSAFNSQLPGTQSIATTLFAATPSVPDHVLTHTFQVGTKEVQKIKSRLAPKK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02084 225 SMART Cupin_1_3 66 215 IPR006045 -
Pumo3g02084 225 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 23 219 - -
Pumo3g02084 225 PRINTS Germin signature 115 135 IPR001929 GO:0030145
Pumo3g02084 225 PRINTS Germin signature 178 193 IPR001929 GO:0030145
Pumo3g02084 225 PRINTS Germin signature 145 165 IPR001929 GO:0030145
Pumo3g02084 225 CDD cupin_OxOx 30 221 IPR001929 GO:0030145
Pumo3g02084 225 Gene3D Jelly Rolls 29 223 IPR014710 -
Pumo3g02084 225 SUPERFAMILY RmlC-like cupins 30 220 IPR011051 -
Pumo3g02084 225 Pfam Cupin 69 215 IPR006045 -
Pumo3g02084 225 FunFam germin-like protein subfamily 2 member 1 29 223 - -
Pumo3g02084 225 ProSitePatterns Germin family signature. 110 123 IPR019780 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02084 Pumo-Chr3 32553115 32555166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02084 8 225 Miscellaneous Gene Families AT3G05930 55.708 2.24e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02084 - - gmx:100791828 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03559 5 84980020 84981663 Pumo3g02084 3 32553115 32555166 PCT