Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02082 ATGGGAGACAAAGAGGTAAAGGATGAACAAAAAGGTGGATTCAGGGCCTCCATGTTTATTTTTGTGTTATCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCTTAGTCCTATATTTTTATGGTGTGATGCACTTTGATCTGTCCAACTCTGCCAACACCCTGACAAACTTTATGGGTTCAACTTTCTTGCTCTCACTCCTTGGTGGCTTCATCTCGGACACTTACTTCAACAGACTAACCACATGCTTGCTTTTCGGATCACTCGAAGTTCTGGCTTTGGTAATGCTCACGGTTCAAGCTGCTCTGGACCATTTACACCCAGATTTTTGTGGCAAGTCAAGCTGTGTCAAAGGTGGCATAGCTGTCATGTTTTACTCATCATTGTATTTATTGGCTTTGGGCATGGGAGGAGTGAGAGGTTCCTTGACTGCATTTGGTGCTGACCAATTTGATGAAAAGAATCCAAGAGAAGCAAAGGCTCTTGCAAGCTTCTTCAATTGGCTCTTGCTGAGTTCAACAGTGGGGTCAATTATAGGGGTCACTGGGGTTGTGTGGGTTAGCACCCAAAAAGCTTGGCACTGGGGCTTTATCATAATAACTGTAGCTTCCTCCATTGGATTTCTCACCCTTGCTCTTGGCAAGCCATTTTACCGCATCAAAACTCCTGGCCAAAGCTCCATTTCAAGGATTGCTCAAGTTATTGTTGTGGCTTTTAAAAACCGGAAGCTGGCACTTCCAGAGTCTCATGAAGAACTTTATGAGGTTTATGAAGATGCTACATTAGAGAAGATTGCACACACCAACCAAATGAGGTTTCTAGATAGAGCAAGCATTCTTCAAGAAAACATTGAGCCACAGCCATGGAAAGTGTGCACAGTGACACAGGTTGAAGAAGTGAAGATCCTAACCAGAATGTTACCTATATTAGCCAGTACCATTATAATGAACACTTGTTTAGCACAGCTTCAAACATTCTCAGTTCAGCAGGGGAATGTGATGAACTTGAAACTTGGTTCTTTTACTGTGCCTGCACCATCCATTCCAGTTATACCCCTTCTTTTCATGTCCATCCTGATTCCCCTCTATGAATTCTTCTTTGTGCCATTTGCACGAAAGATCACTCACCACCCCTCTGGGGTTACACAACTTCAAAGAGTAGGTGTGGGGTTAGTACTTTCTTCCATTTCAATGACAATAGCTGGGATAGTAGAAGTGAAAAGAAGGGACCAAGGAAGGAAGGACCCTTCAAGGCCAATTAGTCTTTTTTGGTTATCTTTCCAATATGCTATATTTGGAATTGCAGACATGTTCACTCTCGTAGGACTCCTAGAATTCTTCTACAGAGAAGCACCTGAAACCATGAAGTCACTGTCAACTTCTTTCACATATTTGTCCATGTCTCTTGGTTACTTCTTGAGCACAGTCTTTGTGGAAGTCATTAATGCTGTTACCAAAAGAATCAATCCAAGCAAACAAGGATGGTTGCATGGCTTGGACTTAAACCAAAACAATCTCAACTTGTTCTATTGGTTCTTAGCAATCCTTAGCTGCCTTAATTTTTTTAACTTCCTTTATTGGGCATCTTGGTACAAGTACAAAGCTGAAGACAACAACAATTCAAAGGTGAATTTGAATGCTCTCAAAGCGGTTGGTGAGAGAAAACAAGATGAGGAAGAGAAGAAGGATATGAGAGTTAAGGCTAAAGAAAGCAGCCAAACAAGTGAAGCCAATACTGAGGGGCCCTCTTCCTCTGATGAAACAGATGATGGAAGGAACTCTAGGGAATGGAAGCACAGATAA 1809 0.4212 MGDKEVKDEQKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSNSANTLTNFMGSTFLLSLLGGFISDTYFNRLTTCLLFGSLEVLALVMLTVQAALDHLHPDFCGKSSCVKGGIAVMFYSSLYLLALGMGGVRGSLTAFGADQFDEKNPREAKALASFFNWLLLSSTVGSIIGVTGVVWVSTQKAWHWGFIIITVASSIGFLTLALGKPFYRIKTPGQSSISRIAQVIVVAFKNRKLALPESHEELYEVYEDATLEKIAHTNQMRFLDRASILQENIEPQPWKVCTVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGNVMNLKLGSFTVPAPSIPVIPLLFMSILIPLYEFFFVPFARKITHHPSGVTQLQRVGVGLVLSSISMTIAGIVEVKRRDQGRKDPSRPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPETMKSLSTSFTYLSMSLGYFLSTVFVEVINAVTKRINPSKQGWLHGLDLNQNNLNLFYWFLAILSCLNFFNFLYWASWYKYKAEDNNNSKVNLNALKAVGERKQDEEEKKDMRVKAKESSQTSEANTEGPSSSDETDDGRNSREWKHR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02082 602 FunFam protein NRT1/ PTR FAMILY 4.5 1 542 - -
Pumo3g02082 602 Gene3D MFS general substrate transporter like domains 1 542 IPR036259 -
Pumo3g02082 602 MobiDBLite consensus disorder prediction 553 602 - -
Pumo3g02082 602 SUPERFAMILY MFS general substrate transporter 126 538 IPR036259 -
Pumo3g02082 602 MobiDBLite consensus disorder prediction 587 602 - -
Pumo3g02082 602 Pfam POT family 84 494 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pumo3g02082 602 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 535 - -
Pumo3g02082 602 MobiDBLite consensus disorder prediction 553 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02082 Pumo-Chr3 32535610 32539121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02082 9 545 Organic Solute Cotransporters AT1G59740 43.478 2.54e-151 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02082 K26548 - gmx:100817702 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02082 3 32535610 32539121 Pumo3g02082 3 32535610 32539121 ECH
Pumo5g03560 5 84993723 84996566 Pumo3g02082 3 32535610 32539121 PCT