Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00076 ATGATGCCATCCAACATTATCTCTACCCTACTCACGAGTGCAACACCGACATCTTCAGTTCTTCTAGAAATCAATAAGGTGAGGAAGTTACAGGTTGTTTCCCCTGTTCCTGCGGACATAGACATTGCAAACTCGGTTGAACCAGTTCATATCTCTCAGATTGCCAAAGACCTCAACCTTAGTCCCAATCACTATGACCTTTACGGTAAATATAAGGCTAAGGTTTTGTTGTCGGTTCTTGATGAGCTTCAAGGATCAGAAGATGGGTACTATGTTGTGGTCGGAGGCATTACTCCGACTCCTCTTGGGGAAGGCAAATCTACCACTACAGTGGGGCTCTGTCAAGCTTTAGGTTCTTTTCTTGATAAAAAGGTAGTTACCTGCCTTCGTCAACCATCTCAAGGACCTACTTTTGGAATTAAAGGAGGTGCAGCTGGTGGTGGCTATAGCCAAGTTATTCCCATGGATGAATTCAATCTTCATCTAACAGGAGATATTCATGCAATAACTGCAGCAAACAATCTTCTAGCTGCTGCAATTGATACCCGAATTTTCCATGAGTCAACACAGTCAGATAAGGCTCTTTTTAATCGGTTGTGCCCTCCAAATAAAGAAGGGAAAAGGAGCTTTAGTGATGTCATGTTTAGGCGTCTTAAGAAGCTTGGTATGTCAAAGACCAATCCAGATGATCTTACACCAGAAGAAGTAAATAAATTTGCTAGGCTTGATATTGACCCAAACTCTATCACATGGAGGAGAGTAATGGACATCAATGACCGATTCTTGAGAAAAATTACTATTGACCAGGGACCTGACGAGAAAGGAATGGTGAGAGAAACAGGCTTTGATATTTCAGTTGCTAGTGAGATAATGGCTGTTTTGGCACTGACAACATCCTTAGCTGATATGCAAGAGAGGCTTGGGAAAATGGTTATTGGAAATAGCAAGAGTGGTGACCCAATATCTGCTGATGATCTAGGTGTTGGAGGTGCTTTAACAGTTTTAATGAAGGATGCCATTCACCCTACCCTTATGCAGACTCTGGAAGGAACTCCTGTTCTTGTTCATGCAGGTCCATTTGCAAATATTGCTCATGGGAATTCTTCTATTGTGGCTGATAAGATTGCACTAAAGTTAGTTGGACCAGGTGGATTTGTAGTTACTGAAGCTGGTTTTGGTGCTGATATTGGAGCCGAAAAGTTTATGAACATTAAGTGTCGTTATAGTGGTTTGACACCTCAATGTGCGATTATTGTGGCAACTATAAGAGCACTAAAAATGCATGGTGGAGGGCCAGCAGTTGTTGCTGGAAAACCTCTTGACCATGCATATTTGACTGAAAATATTGCCCTGGTTGAGGCTGGTTGTGTGAATATGGCACGACATATATCAAATACAAAATCTTACGGTGTAAATGTTGTAGTTGCTATCAACAAGTTTTCAACTGACACTGAAGCTGAGCTAAATGCAGTTCGGAGTGCTGCATTAGCTGCTGGAGCTTATGATGCTGTAATTTGTACCCATCATGCGCATGGTGGCAAAGGAGCCGTTGACCTGGGCATTGCAGTTCAAAAAGCCTGCGAGAATGTGACACAGCCATTGAAGTTCCTGTATCCTCTTGACCTGAGTATAAAAGAGAAAATAGAGGCAATAGCAAAGTCATATGGAGCTAGTGGCGTTCAGTATTCAGAACAGGCTGAGAAGCAGATTGAGATGTATAGCAAGCAAGGATTTTCAGGTCTTCCAATCTGCATGGCCAAGACTCAGTATTCTTTCTCAGACAATGCTGCAGCAAAGGGAGCTCCAAGTGGGTTTGTCTTACCCATAAGGGATGTAAGAGCTAGTATAGGTGCTGGATTTATTTATCCTTTAGTTGGAACAATGAGTACGATGCCAGGGCTTCCAACAAGGCCATGCTTCTATGACATTGATCTTGATACAACAACTGGAAAAGTCATTGGTCTCTCTTAA 1971 0.4231 MMPSNIISTLLTSATPTSSVLLEINKVRKLQVVSPVPADIDIANSVEPVHISQIAKDLNLSPNHYDLYGKYKAKVLLSVLDELQGSEDGYYVVVGGITPTPLGEGKSTTTVGLCQALGSFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFNRLCPPNKEGKRSFSDVMFRRLKKLGMSKTNPDDLTPEEVNKFARLDIDPNSITWRRVMDINDRFLRKITIDQGPDEKGMVRETGFDISVASEIMAVLALTTSLADMQERLGKMVIGNSKSGDPISADDLGVGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPLDHAYLTENIALVEAGCVNMARHISNTKSYGVNVVVAINKFSTDTEAELNAVRSAALAAGAYDAVICTHHAHGGKGAVDLGIAVQKACENVTQPLKFLYPLDLSIKEKIEAIAKSYGASGVQYSEQAEKQIEMYSKQGFSGLPICMAKTQYSFSDNAAAKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDIDLDTTTGKVIGLS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00076 656 Gene3D - 187 252 - -
Pumo3g00076 656 FunFam Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like 187 252 - -
Pumo3g00076 656 ProSitePatterns Formate--tetrahydrofolate ligase signature 2. 419 430 IPR020628 GO:0005524
Pumo3g00076 656 Hamap Formate--tetrahydrofolate ligase [fhs]. 36 656 IPR000559 GO:0004329|GO:0005524
Pumo3g00076 656 Pfam Formate--tetrahydrofolate ligase 38 656 IPR000559 GO:0004329|GO:0005524
Pumo3g00076 656 FunFam Putative formate--tetrahydrofolate ligase 543 631 - -
Pumo3g00076 656 FunFam C-1-tetrahydrofolate synthase, cytoplasmic 37 195 - -
Pumo3g00076 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 652 IPR027417 -
Pumo3g00076 656 ProSitePatterns Formate--tetrahydrofolate ligase signature 1. 139 149 IPR020628 GO:0005524
Pumo3g00076 656 Gene3D - 294 542 IPR027417 -
Pumo3g00076 656 Gene3D - 35 186 IPR027417 -
Pumo3g00076 656 Gene3D Formyltetrahydrofolate synthetase, domain 3 543 631 - -
Pumo3g00076 656 CDD FTHFS 51 655 IPR000559 GO:0004329|GO:0005524
Pumo3g00076 656 FunFam C-1-tetrahydrofolate synthase, cytoplasmic isoform X2 270 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00076 Pumo-Chr3 1064706 1069779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00076 K01938 - gmx:100806844 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00076 3 1064706 1069779 Pumo3g00076 3 1064706 1069779 ECH
Pumo3g00076 3 1064706 1069779 Pumo4g02687 4 48131571 48132773 ECH