Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01693 ATGAAGATGATTCTAACCCTCTTCTTCTTCTTCATCTTATCCATCGTCACCCACTCCCACGCCTCCGTGGTAGATTTCTGCGTGGCGGATTACACAGCCCCCAATGGCCCTGCAGGGTACTCATGCAAGAACCCTGCAAAGGTCACTGTGGACGACTTTGTCTACTCCGGCCTCGGCACTGCCGGCAACACCTCAAACATCATCAAAGCGGCAGTGACACCTGCATTCGACGCACAATTCCCCGGCGTCAACGGCCTCGGAATTTCAATTGCGCGTTTGGACTTAGCACCTGGTGGAGTTATACCTCTTCACACGCACCCCGGTGCCTCTGAGTTGCTCGTTGTCGTGCAGGGAAAAATCTGCACCGGCTTCATTGCCTCCGACAACACTGTGTACCTCAAAACGCTCGAGAAGGGCGATGTCATGGTGTACCCTCAAGGCTTGCTGCACTTCCAGATCAACGCTGGGGGCTCTCAGGCTTTAGCCTTTGTGAGCTTCAGCAGCGCCAACCCCGGCCTCCAGATTCTCGACTTTGCTTTGTTCAAGAGTGATTTCCCCACTGAACTCATAACAGAAACCACTTTCATTGATGCTGCTATGGTCAAGAAGCTCAAGGGTGTTCTTGGAGGGTCAGGTTAA 639 0.5305 MKMILTLFFFFILSIVTHSHASVVDFCVADYTAPNGPAGYSCKNPAKVTVDDFVYSGLGTAGNTSNIIKAAVTPAFDAQFPGVNGLGISIARLDLAPGGVIPLHTHPGASELLVVVQGKICTGFIASDNTVYLKTLEKGDVMVYPQGLLHFQINAGGSQALAFVSFSSANPGLQILDFALFKSDFPTELITETTFIDAAMVKKLKGVLGGSG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01693 212 CDD cupin_OxOx 19 208 IPR001929 GO:0030145
Pumo2g01693 212 SMART Cupin_1_3 56 202 IPR006045 -
Pumo2g01693 212 SUPERFAMILY RmlC-like cupins 22 205 IPR011051 -
Pumo2g01693 212 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 17 205 - -
Pumo2g01693 212 FunFam Auxin-binding protein ABP19a 20 211 - -
Pumo2g01693 212 Gene3D Jelly Rolls 20 211 IPR014710 -
Pumo2g01693 212 PRINTS Germin signature 104 124 IPR001929 GO:0030145
Pumo2g01693 212 PRINTS Germin signature 167 182 IPR001929 GO:0030145
Pumo2g01693 212 PRINTS Germin signature 134 154 IPR001929 GO:0030145
Pumo2g01693 212 ProSitePatterns Germin family signature. 99 112 IPR019780 GO:0030145
Pumo2g01693 212 Pfam Cupin 57 201 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01693 Pumo-Chr2 31841583 31842722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01693 1 211 Miscellaneous Gene Families AT5G20630 68.720 4.73e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01693 - - gmx:100806553 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00645 4 8492281 8493358 Pumo2g01693 2 31841583 31842722 PCT