Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01601 ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCGGAGGCTGCTTCAGTGTTGAAGCACTCTCTTGGGTTGGCACGCAGAAGGGGCCATGCACAGGTTACCCCTCTGCATGTGGCTGCAACTTTGCTGAGCCTAAGAGCCAGTTCTCTGAGAAGGGCTTGTCTCAAGTCTCAGCCACACCAAACTTCACACCCTCTTCAGTGCAGAGCCCTTGAGCTTTGCTTCAATGTGGCCCTCAACAGGCTCCCAACTACACCTGGCCCCTTGCTCCACACTCAGCCCTCTCTCTCCAATGCTCTCATTGCTGCACTCAAGAGAGCACAGGCTCACCAGAGAAGGGGGTGCATTGAGCAACAACAACAACAACCACTTCTCACCATCAAGGTTGAGCTTGAACAGCTCATTATATCTATCCTTGATGACCCTAGTGTTAGTAGGGTTATGAGAGAAGCTGGTTTTTCTAGCACTGCTGTTAAGAGCAACATAGAGGACACTTCTTCAGCACCTTCTGTGTTCCAGTGCTACAACAGTTCTGGTGGTGTTTTCTCTTCTCCTTGCTCACCTTCTCCCAGTGAGAACAACAACACTGCAGCCACTGCTTTCAGGCAGAACCATCATTTCCTGGCTGCTTACACTTCTGCTTCTGAGTTTGGTTCTCCACTTCTGTTCTCTCCACCACAGAAGAAGGCCTCGGTGTTTCCCATCACTGAGTCACCACCACCACCACCCTCTAATTCTTCCAAGGATGATATCAAGGTGGTTCTTGATGTCCTCTTGAGGAAGAAGAAGAGGAACACTGTGATAGTTGGTGACTCGGTGGCACTCACTGAAGGCCTTGTGGGGGAGCTTATGGGGAAGCTGGAGAGAGGAGAGGTCCCAGATGAGTTGAAGTCAACACATTTCATCAAGTTTCAGCTTGCACCGGTTTCTTTGAGGTTCATGAAAAGGGATGAAGTGGAGATGAGTCTCTCAGCACTGAAGAGGAAGGTGGATTCTGTTTCATCAGGAGCCATTTTCTACGTTGGAGACCTGAAGTGGACAGTGGATGCAACAGCTTCAAATGAAAAAGAGGAAGGTGATGTTTGTGGTTATAACCCAGTTGATCATCTAGTTGCTGAAATAGGGAAGTTGTTTTGTGACTCCAACACTAAGGTGTGGCTTGTGGCCACAGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCCCCTCTTGAGACTCAGTGGTCTCTTCAAGCAGTTCCTGTTCCATCTGGTGGACTTGGCTTGAGTCTCCATGCTTCAAGTGTTCATGATTCAAAGATGACAATCTCCCAGAACCCATCTCATATGCTGGAAACAAAGCTCTTCAGTAACAACAAGGAGGAGCAGGATAACCTCAACTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCTCAGTTGTTCAAACCAGGCCAGAAGAAACTGTTACCATCCTGGCTTCAGTCTCATACCACCGAAGCCCATCAAAAGGATGAGTTAACTCAGCTGAAAAGGAAATGGAACAGACTATGCCACTGTCTGCACCAGAGCAAGCAGTCTCAGAACCACTGGAGCAACACTTTACATGGCAATCACAGTTCAAATGGCAAGATCTACCCTTACAATTCATCATATCCCTGGTGGCCAAGCCAAGGCAGTGTCTTCACAGATTCAAGCTCCATATCTTTTGCTGATTCACCTGCCAAACCAGCTTATAGCTCCAACAATGTTGTCCCTCGGTTCAGGCGCCAACAATCATGCACCATTGAGTTCAATTTCAGTGATGTGACTCAGAAAAAGCCATCCACAGCCTTGGATTCTCTCAAGGGCATGGAAGGTAATAATAATGAAGTAAAGATTACTCTTGCTCTTGGAAATTCAACATTCGGTGGTTCGGGGCAAACGGTGGAAAATATCATAACTACTGATAGAACACTGCGACGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAATCTGAGACAGTTCCTTCCATAGCTGAGGCCTTGGTTGATCCCAAATCAGCAAAGCAAAGTGCTACTACTTGGCTGTTATTGCAAGGAACTGACTCTATTGGGAAAACAAGGTTGGCACGTGCCATTGCAGAATCAGTGTTTGGCTCAGTTGATGTGCTCCTTCACTTGGACATGCTGAAAAACAACAAGGAGAATTCAGCAACCCCATTTTGTGAAATGGTGGCTGGAGCATTGAAAAACCATGAGAAGCTTGTGGTTCTGATAGAAAGTCTGGATTTTGCTGATGCCCAGTTCAGGAAGTTCCTTGCAGATGGGTTTGAAACTGCAAAGTTTGGAAATTTAAGTATGACTGAGGAGAGTTCAGGCCAAGCAATATTCATATTGACCAATGGTGACACTAGGAGCAATGAAGAGCAGAACAACAAGGACTCAGTGATGAAGCTGGTGCTGCAGATAAGTGAAACCAAGCCTAGTTTGGAGTCTTCATCACCTTGTTTGGGTCAGAAGAGAAGGGCTGAAGTACTGGATTTGTTTACCAAGGTTAAGAGTCCAAGGGTTGAGGAGAAGGAGGAGGGTAGGAAAGTGTTTTCAAGGCATTCAAGCTTCAACAATCTTGACCTGAACATGAAAGCTGATGAAGAGGATGATGGGGAAGAGAAAACAGGTGGAAATAGTCCAATTTCAAGTGATTTGACTAGGGAAACTGTGGTTGATCCATTGAGCTGGAATGGGGCACTTGACTCAATCGAGAACAGGTTTGAGTTGAATGAAGGTCCAGAGAGGGAGAGGGAGGTGGCAGATATGTTTCTGTCAAAGATCAAAGAGTCTTTTGAGGAGGTATATGGGGTGGTGGTGAATTTTACTGTAGAGGAGAGGGTGATAGAGGAAATTGGTGTGGGGTGTGGTAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTACAGATAGTTAACTTTGGTGGGAAGGAGGGGGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGGAGATAGGAAATCGGATAGTGGGTTCATGGGTTCTTGTTTGCCCAAGAATGTCCAAGTTAACTACTTCATGGATTGA 3105 0.4599 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPHQTSHPLQCRALELCFNVALNRLPTTPGPLLHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKSNIEDTSSAPSVFQCYNSSGGVFSSPCSPSPSENNNTAATAFRQNHHFLAAYTSASEFGSPLLFSPPQKKASVFPITESPPPPPSNSSKDDIKVVLDVLLRKKKRNTVIVGDSVALTEGLVGELMGKLERGEVPDELKSTHFIKFQLAPVSLRFMKRDEVEMSLSALKRKVDSVSSGAIFYVGDLKWTVDATASNEKEEGDVCGYNPVDHLVAEIGKLFCDSNTKVWLVATASYQTYMRCQMRQPPLETQWSLQAVPVPSGGLGLSLHASSVHDSKMTISQNPSHMLETKLFSNNKEEQDNLNCCEECASNYEKEAQLFKPGQKKLLPSWLQSHTTEAHQKDELTQLKRKWNRLCHCLHQSKQSQNHWSNTLHGNHSSNGKIYPYNSSYPWWPSQGSVFTDSSSISFADSPAKPAYSSNNVVPRFRRQQSCTIEFNFSDVTQKKPSTALDSLKGMEGNNNEVKITLALGNSTFGGSGQTVENIITTDRTLRRAHICKLLQENVPWQSETVPSIAEALVDPKSAKQSATTWLLLQGTDSIGKTRLARAIAESVFGSVDVLLHLDMLKNNKENSATPFCEMVAGALKNHEKLVVLIESLDFADAQFRKFLADGFETAKFGNLSMTEESSGQAIFILTNGDTRSNEEQNNKDSVMKLVLQISETKPSLESSSPCLGQKRRAEVLDLFTKVKSPRVEEKEEGRKVFSRHSSFNNLDLNMKADEEDDGEEKTGGNSPISSDLTRETVVDPLSWNGALDSIENRFELNEGPEREREVADMFLSKIKESFEEVYGVVVNFTVEERVIEEIGVGCGNFTNSMFEKWLKDIFQSSLQIVNFGGKEGGIGFTLCWGGKGDRKSDSGFMGSCLPKNVQVNYFMD 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01601 1034 FunFam protein SUPPRESSOR OF MAX2 1 9 170 - -
Pumo2g01601 1034 SUPERFAMILY Double Clp-N motif 12 165 IPR036628 -
Pumo2g01601 1034 Pfam Clp amino terminal domain, pathogenicity island component 131 166 IPR004176 -
Pumo2g01601 1034 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Pumo2g01601 1034 Gene3D - 9 169 IPR036628 -
Pumo2g01601 1034 Coils Coil 456 476 - -
Pumo2g01601 1034 Gene3D - 637 847 IPR027417 -
Pumo2g01601 1034 Gene3D - 244 421 IPR027417 -
Pumo2g01601 1034 MobiDBLite consensus disorder prediction 873 899 - -
Pumo2g01601 1034 ProSiteProfiles Clp repeat (R) domain profile. 8 170 IPR004176 -
Pumo2g01601 1034 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 996 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01601 Pumo-Chr2 30101530 30105634 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01601 - - gmx:102660146 1741.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01601 2 30101530 30105634 Pumo2g01601 2 30101530 30105634 ECH
Pumo4g00735 4 9579412 9583587 Pumo2g01601 2 30101530 30105634 PCT