Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01587 ATGCCACCGGCGCTGTCGGATCCGTTGTCGGTGACTCCGGCGAGCACCGACGCTGTTTTGCAGCGATCGGCGCCGGAGAATCGGCGATTCGGTGATCTTAGAGGGTTGCAGTGGCGGATAAATCTTGGGGTGTTGCCGTCTTCGTCTTCAACTTCAATTGATGATCTTCGTCGAGTCACCGCTAATTGTAGAAGAAGGTATGCTAGCTTGAGAAGGCGCCTTCTGGTTGAACCACATGTTCCAAAGGATGGAACTAATTCACCCAATCTTGTCATTGACAATCCACTTTCATTAAATCCAGATAGTACATGGGGTCGCTTTTTCCGCAATGCAGAGCTGGAGAGAATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGCAGTTATTTTCAGACTTCAGGATGCCAAAGCATGTTGAGACGAATTTTATTACTGTGGTGTCTCAGGCACCCAGAATGTGGTTATAGACAAGGAATGCATGAACTACTTGCTCCTCTGCTTTATGTTCTCCAAGTTGATTTGGAGCGTCTTTCGGAAATTCGGAAGCTTTACGAAGATCACTTTACAGACAGATTTGATGGCCTTTTATGTCAAGAGAATGATCTTTCTTACAGCTTTGATTTTAAAAAATCTCCAGAATTGATGGAGGATGAATTTGGTTCCCATGGAAATGCTGTGAAAGTCAATAGTCTTGAGGAACTTGATCCTGAGATACAGACTATTGTATTACTAAGTGATGCTTATGGAGCTGAAGGCGAACTGGGCATTGTTTTATCTGAGAAATTCGTGGAACATGATGCATACTGTATGTTTGATGCTTTGATGAATGGGGCCCATGGTTCAGTTGCAATGGCTGATTTCTTCTCGTCCTCCCCTGTATCTGGGTCCCATAGTGGCCTGCCTCCTGTGATTGAAGCTTCTACTGCATTGTATTATTTGCTGTCTCTAGTAGATTCATCTCTCCATAGCCATCTTTTTGATCTTGGGGTTGAACCCCAGTACTTTTCTCTTCGATGGTTGCGAGTTTTATTTGGACGAGAATTTTCACTTGCCAACCTCTTGATCATCTGGGATGAGATCTTTGCATCGGAGAATAGCAGCATGGAAAAAGGTGCTGATGACTGTGAGTTCAGGATCTTAAATTCACCTCGTGGAGCATTTATCTCTGCTATGGCAGTAGCAATGATACTTCATTTAAGATCTTCACTACTCGCAACTGAAAACCCTACAAGGTGTCTTCAGAGATTATTAAACTTCCCTGAAGACATTAATATTGAAAAACTACTAGAGAAGGCTAAATCCTTGCAGGCTTTTGCACTGAGTGTTGATATTTCATCCTCGTCACTTTTGTTTTTAGGGTCTCATTACCAAAGTAAATCTATGTATACTAGATCTGTGACCCTTCCATCTGAATCTGTGTCTCCGAAAACTCCTCTGAATTTGTTACCTGATAGCTACTGGGAAGAAAAGTGGAGGGTTGCCCACAAGGCTGAAGAACAAAGGCAAGATAGTCTAGAAAAACAGGTTCCCACTCGGAAAAAGGGATGGACAGAAAGGGTAAAGTCCAGTTTGAGAAGAGCAAAATCTGACCCTCCCTTGTCAAGGATTCAGAGTGGCAAAAATTTTAGGCGCAGTTTGTTGGAAGATCTTCACAAGGTACTTGGCTCAGAGGAAGATGCAGAGCAAATGCAGCCAGATGAAACACTATCGCAGCATGATAATCCTTCTGAAGCAGTTGAAGTACAAGAAGATAATGGCTGTAATGGTGACAACAATTACTTGTCTGATGATAGATCTCCAAGTGGAAATTCTGGCAGTGAGGAAGACTTGTCTATATTTTCTGACCCAACTAGTCCCCCTAATGAGGCCAATGATCATGAAATTACCTCAGCAAAAAGTAGTGTTGCATCTAATTCGTCCCTAGACGAATGCAATGAAACTTCAGGTACCAGTTCACCATTTCCAATCTCCGATCCTCCTGAGAACATTTCTCAGACATCACATTGCAATACAGAAAATTCTGAATGCAATGAAACTTCACATACCCGTCCCAATGATTCACCCCTTCCAATCTCTGATCCTCCTGAGAACATTTATCAGACATCACAGTGCAATTCAGAAAATTCTGAATGCAATGAAACTTCAGGTACCAGTCCCAATGATCCACCCCTTCCAATCTCTGATCCTCCTGAGAACATTTCTCAGACATCACAGTCCAATACAGGAAATTCTGAATGCAATGAAATTTCAAATACCCGTCCCAATGATCCACCCCTTCTGATTTCCGATCCTCTGAAGAACATATCTCCGACATCAGGGTGCAATAGCGATGATGCAGGAAATACAGCCACTCCTCCTAAAGAGAAAAAACAGAATAAGTTGCAGTGGTTATGGCCATTTGGACGGAATAATTCTGAGGCTATCTCTGACAAAGTAGGAGGTGCTGCCGAAGCTGCCAACCGTGGTGCCCCTCAAAACAATACTCCACAACCAGCCTCATCTGCAGCTAATGAGCCTTGTAGTTCTGTTAGTTGCAGTGGAGAATCTGTTGACAAGAATGTGATGGGCACTTTGAAGAATATTGGGCAGTCTATGCTTGACCATATTCAGGTAATTGAATCTGTTTTCCAACAAGACCGCAAAGGCCAAGTTACTGCCATGACAGCTCTCAAAGAGCTTAGGAAAATTAGCAATCTTCTGTCTGAGATGTGA 2718 0.4301 MPPALSDPLSVTPASTDAVLQRSAPENRRFGDLRGLQWRINLGVLPSSSSTSIDDLRRVTANCRRRYASLRRRLLVEPHVPKDGTNSPNLVIDNPLSLNPDSTWGRFFRNAELERMVDQDLSRLYPEHGSYFQTSGCQSMLRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDLERLSEIRKLYEDHFTDRFDGLLCQENDLSYSFDFKKSPELMEDEFGSHGNAVKVNSLEELDPEIQTIVLLSDAYGAEGELGIVLSEKFVEHDAYCMFDALMNGAHGSVAMADFFSSSPVSGSHSGLPPVIEASTALYYLLSLVDSSLHSHLFDLGVEPQYFSLRWLRVLFGREFSLANLLIIWDEIFASENSSMEKGADDCEFRILNSPRGAFISAMAVAMILHLRSSLLATENPTRCLQRLLNFPEDINIEKLLEKAKSLQAFALSVDISSSSLLFLGSHYQSKSMYTRSVTLPSESVSPKTPLNLLPDSYWEEKWRVAHKAEEQRQDSLEKQVPTRKKGWTERVKSSLRRAKSDPPLSRIQSGKNFRRSLLEDLHKVLGSEEDAEQMQPDETLSQHDNPSEAVEVQEDNGCNGDNNYLSDDRSPSGNSGSEEDLSIFSDPTSPPNEANDHEITSAKSSVASNSSLDECNETSGTSSPFPISDPPENISQTSHCNTENSECNETSHTRPNDSPLPISDPPENIYQTSQCNSENSECNETSGTSPNDPPLPISDPPENISQTSQSNTGNSECNEISNTRPNDPPLLISDPLKNISPTSGCNSDDAGNTATPPKEKKQNKLQWLWPFGRNNSEAISDKVGGAAEAANRGAPQNNTPQPASSAANEPCSSVSCSGESVDKNVMGTLKNIGQSMLDHIQVIESVFQQDRKGQVTAMTALKELRKISNLLSEM 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01587 905 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 106 283 - -
Pumo2g01587 905 MobiDBLite consensus disorder prediction 820 843 - -
Pumo2g01587 905 Pfam Rab-GTPase-TBC domain 265 367 IPR000195 -
Pumo2g01587 905 Pfam Rab-GTPase-TBC domain 114 175 IPR000195 -
Pumo2g01587 905 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 302 438 IPR035969 -
Pumo2g01587 905 MobiDBLite consensus disorder prediction 823 843 - -
Pumo2g01587 905 MobiDBLite consensus disorder prediction 587 689 - -
Pumo2g01587 905 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 32 326 IPR035969 -
Pumo2g01587 905 SMART tbc_4 25 409 IPR000195 -
Pumo2g01587 905 MobiDBLite consensus disorder prediction 767 791 - -
Pumo2g01587 905 ProSiteProfiles TBC/rab GAP domain profile. 28 366 IPR000195 -
Pumo2g01587 905 MobiDBLite consensus disorder prediction 696 723 - -
Pumo2g01587 905 MobiDBLite consensus disorder prediction 500 530 - -
Pumo2g01587 905 MobiDBLite consensus disorder prediction 732 759 - -
Pumo2g01587 905 Gene3D - 305 444 - -
Pumo2g01587 905 MobiDBLite consensus disorder prediction 500 542 - -
Pumo2g01587 905 FunFam TBC1 domain family member 5 305 446 - -
Pumo2g01587 905 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 28 434 - -
Pumo2g01587 905 MobiDBLite consensus disorder prediction 560 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01587 Pumo-Chr2 29867583 29873458 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01587 K18469 - gmx:100782008 1595.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01587 2 29867583 29873458 Pumo2g01587 2 29867583 29873458 ECH
Pumo4g00749 4 9748708 9753967 Pumo2g01587 2 29867583 29873458 PCT