Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01060 ATGGCTTCTTTCAATCTCTCTTATTCTTCCTCACCAGCCCTCTCATGTCCGCGGGCAAGCAAACACTTCAAATTGTTCAATGATGTGCCTTTTGTCCGAATGAATTCTAAATTTGCCTCAAGTGACAATGCTGTTGGGAGAATTAAAGCTACGTTGATCTCTGGAGGGGGTGATCTACTTTCCTATCCAAATGGCAATGACATTGTGATAGGTAAAAATCTGGTTGGAGATGAATCTGTTCGAATTGAGGTACAGCCTAATGGAACACTGGCAGCAGACACAGGGCTAACAAGCAGTGTTTTCTCTGTTGACAACGATGAATTTGATTTGGACAGCCCCACGGCAGGTTTTGCTTCCATCCCTGAGGCAATCGAAGACATTCGCCAGGGAAAGATGGTAGTGGTTGTAGACGATGAAGATCGAGAAAATGAAGGAGACTTGATAATGGCAGCACAGTTGGCAACACCCGAGGCAATGGCTTTTATTGTAAAGCATGGAACTGGTATAGTTTGTGTAAGCATGAAAGAGGAAGATCTGGATAGATTGGAACTTCCTTTGATGGTGAACAGTAAGGACAATGATGAGAAACTTCGTACGGCATTCACTGTGACAGTGGATGCTAAACATGGTACAACCACTGGGGTGTCAGCTCATGATAGGGCAACAACAGTCTTGGCCCTTGCATCTAGAGATTCTACTCCAGGCGATTTCAACCGCCCAGGCCATATTTTCCCACTAAAATACAGGGACGGTGGTGTCTTGAAGAGAGCCGGACATACAGAAGCTTCTGTTGATCTTGCTGTACTTGCTGGCTTGGATCCAGTAGCAGTTCTGTGTGAGATTGTAGATGATGATGGTTCCATGGCTAGACTGCCAAAGCTTCGCCAGTTTGCAGAGCGTGAAAATTTGAAAATTGTATCTATTGCTGACTTAATAAGATATAGAAGAAAAAGAGATAAGTTAGTGGATCGCTCTTCTGCTGCACGGATACCTACAATGTGGGGACCATTCACAGCTTACTGTTACAGATCACTTTTAGACGGGATTGAGCATATTGCAATGGTTAAGGGTGACATTGGAGATGGACAAGATGTTCTTGTGAGGGTACACTCAGAGTGTCTGACAGGAGACATATTTGGATCTGCCAGATGTGACTGTGGAAATCAGCTTGCACTTGCAATGCAACAGATTGAGGCTGCTGGTAGGGGTGTGCTGGTATATCTCCGTGGACATGAAGGAAGGGGTATTGGATTGGGCCACAAGCTTCGTGCTTATAACCTACAGGATGATGGACGGGATACTGTTGAAGCCAATGAGGAGTTGGGATTGCCAGTTGACTCCAGGGAGTATGGCATTGGCGCACAGATGTTGAGGGACTTGGGTGTTAGATCTATGAAGCTGATGACGAACAATCCAGCAAAATATATTGGGCTCAAAGGTTATGGTTTGACAGTTTCGGGTAGGATCCCATTGTTAACTCTTATCACTTCCGAGAACAAGAGATATTTAGAAACCAAACGTGTGAAAATGGGTCACATATATGGCATGGAATTTAACGGCCGATTGAGCACTCATGACAGTGGTAATGGTAATGCCACTAGGGTTGATGACTCTAATGCTGTTACTAGCTTATAA 1635 0.4459 MASFNLSYSSSPALSCPRASKHFKLFNDVPFVRMNSKFASSDNAVGRIKATLISGGGDLLSYPNGNDIVIGKNLVGDESVRIEVQPNGTLAADTGLTSSVFSVDNDEFDLDSPTAGFASIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKEEDLDRLELPLMVNSKDNDEKLRTAFTVTVDAKHGTTTGVSAHDRATTVLALASRDSTPGDFNRPGHIFPLKYRDGGVLKRAGHTEASVDLAVLAGLDPVAVLCEIVDDDGSMARLPKLRQFAERENLKIVSIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSLLDGIEHIAMVKGDIGDGQDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRSMKLMTNNPAKYIGLKGYGLTVSGRIPLLTLITSENKRYLETKRVKMGHIYGMEFNGRLSTHDSGNGNATRVDDSNAVTSL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01060 544 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 116 512 IPR016299 GO:0009231
Pumo2g01060 544 SUPERFAMILY RibA-like 320 491 IPR036144 -
Pumo2g01060 544 Hamap GTP cyclohydrolase-2 [ribA]. 320 516 IPR000926 GO:0003935|GO:0009231
Pumo2g01060 544 PANTHER GTP CYCLOHYDROLASE II-RELATED 116 515 - -
Pumo2g01060 544 Gene3D GTP cyclohydrolase II 322 493 IPR036144 -
Pumo2g01060 544 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 115 319 IPR000422 GO:0008686|GO:0009231
Pumo2g01060 544 CDD GTP_cyclohydro2 321 513 IPR000926 GO:0003935|GO:0009231
Pumo2g01060 544 Gene3D DHBP synthase 105 321 - -
Pumo2g01060 544 SUPERFAMILY YrdC/RibB 116 318 IPR017945 -
Pumo2g01060 544 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 118 315 IPR000422 GO:0008686|GO:0009231
Pumo2g01060 544 MobiDBLite consensus disorder prediction 524 544 - -
Pumo2g01060 544 Pfam GTP cyclohydrolase II 326 490 IPR032677 -
Pumo2g01060 544 NCBIfam GTP cyclohydrolase II 325 513 IPR000926 GO:0003935|GO:0009231
Pumo2g01060 544 FunFam Riboflavin biosynthesis protein RibBA 322 493 - -
Pumo2g01060 544 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 108 321 - -
Pumo2g01060 544 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 122 314 IPR000422 GO:0008686|GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01060 Pumo-Chr2 15662676 15667418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01060 K14652 - gmx:100801046 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01636 6 24013630 24018355 Pumo2g01060 2 15662676 15667418 PCT