Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00875 ATGCCTCTTCTTCTTCATCATCTTGTGTTAGCTGAGAAGAAAAAAAGTGTGTTGTGTTGTCCCTTAACGTGCGCACCCCCGGCGCAGGAAATGGAGGCTCACGCGAGTTCCTTCGTGTCCAAGGCGCGAACCGCGTTCCATTCCGCAGCAGCGAAAGCGGAACGTGTTCTAATGGACTTCAAAATCGATCTAGATTCTGATAAGCAATTTCACGACGAGTTAGGGAGGCAGCGGGGAGATGAATCTGCTCGGAGTGAGAATGAGTCAAAGTTTCTTAATGAACTGAAGCATATAAAGTGGAGACCTCCACATATAGGAACAAAGCAGGACTGGCAAGATAGAATAAACAACATGCGAAAAGGGAGAAAGGAAGTTGAAGTAACAGATAAAGTTGATTTAAACATGGGCTCTCTTCCATTTTATGATGAAAATTTGTACATCCTCAATGTGAAAAATGATCTTGATGCCAAGGCTTCAGAAGCAATTCCCTCAGTTGAAGGCTTGACTGCTGTGACCAAACACCCCATTCCTCCATCATCTGTCCTGAAGCAGTTGGCTATAGCTATTGAGGCTGGAAGGCAAACAAACTCAATGAAAGATTTTGTAGTTTCATCAAGAGGTTCGTCACCTGCCAGAGAGAAGGCAGGCTTAAGTCTCTCTTCTGTGAAGGCTTTAGTGTTGCGTGAAAAGGAGGACAAACTCACCTCTGAGTTTAGTAGCGATGAGAAAGTTGGGTATTTGATTAATTCATTGTTTGATCAAGAGGGAGAGTTCCTTAGAAGGAAGATCAACTCTGATCAAGAGGAAACTTCCATATCATCTTTACCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTAGTTGTTAAGCTAGCTGAAGTAATCGGAAACTTCAAGACACTTCGAGAAATGTCTCTTTTTTGGTCCAGGGTTGTTGATGAACTGAGAAAACATTGGTCTGAAGAAAAACACTTACCTGGAGTCCCCCGAGATGACATTCCAGACCTGAAGTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCGCCACATTATTGCCTCTGAATCTCTACACTCTATGGTGATGGAAGCCAATTCAAATACATTAGAATCAGCGAACTACACGGACAAAATTCCTACAAGCCCTTTATTATATGCAAGATTAAGAACTGGAGAGCTAGTTCTCCGACTTGGTGCTGATTGCCCATCCGGAGATCTGACATTACTGGAAACTGGCGAGCCTGCATACTCTCCTGTCACCCAGGAGGGACCCTTGCTTACAGAAGACCTGATCAAAGAGACGGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGATGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTGAGATGGTACTCTCCTCCTGATTGGACCGAACGTGAGGAAAGTACTGAGGATAGAGATTCTTTTTATGGCGGTGAGTCAATGTCTACCAGAGGTCAACTAAGTCTGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCAGTTCCAGCTGTTAAACAGGCACCTCTCTACGATGAGGATTTGGCAGTGGAGGGCATTCTAGATGCATTTAAGGACATCCAGCCTTCAGAGCTTTTTGGACAGCTGTTTGTTTCTCTTCTCAGTTTAGGATTTGCAATTGCTGAAACTATGCTGTCTGGCGACATTGACATCTCAAAGTCGTTCAATGATTGCAAGGAGTACATAGTTACCACTTGTCAAAGTGACAGATTCAATGAGAAAGTCAATGAACTTGTTCAGATGTATGAAACGGTGGAGAAAATGTTGCTGAATCCAGATGAGGCACTGAAGATGATGAAGCACATGGAAGAATCAACTATGACTACTGATGAACCAAAGCGCCGGTTTTCTACTGGTGAGCCAAAGCACCGGTTTAAGAGACTTAGCCATATATTTGGTGGCAAAGATAAACTGTTGACAAGGCCTGTCTGGAAAGATGAGGTAAACGATGAAGAAAAGCAGATTCGACATTCTTTCTCAAGTTTCTTTGACAGCAAGTCATCTTTATTTTCAAAGAAGCCTCCTAAGCCTGGAAACCTATACCCTGCTGAGCAACCTCTCTCTCTAGAAAGTGATTGGACAGTTATTTAG 2205 0.434 MPLLLHHLVLAEKKKSVLCCPLTCAPPAQEMEAHASSFVSKARTAFHSAAAKAERVLMDFKIDLDSDKQFHDELGRQRGDESARSENESKFLNELKHIKWRPPHIGTKQDWQDRINNMRKGRKEVEVTDKVDLNMGSLPFYDENLYILNVKNDLDAKASEAIPSVEGLTAVTKHPIPPSSVLKQLAIAIEAGRQTNSMKDFVVSSRGSSPAREKAGLSLSSVKALVLREKEDKLTSEFSSDEKVGYLINSLFDQEGEFLRRKINSDQEETSISSLPRDIHGAPPESLVVKLAEVIGNFKTLREMSLFWSRVVDELRKHWSEEKHLPGVPRDDIPDLKSCLLYQQFQVINCCISRKRRHIIASESLHSMVMEANSNTLESANYTDKIPTSPLLYARLRTGELVLRLGADCPSGDLTLLETGEPAYSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTEREESTEDRDSFYGGESMSTRGQLSLRMQKEGNLWRELWETSKPVPAVKQAPLYDEDLAVEGILDAFKDIQPSELFGQLFVSLLSLGFAIAETMLSGDIDISKSFNDCKEYIVTTCQSDRFNEKVNELVQMYETVEKMLLNPDEALKMMKHMEESTMTTDEPKRRFSTGEPKHRFKRLSHIFGGKDKLLTRPVWKDEVNDEEKQIRHSFSSFFDSKSSLFSKKPPKPGNLYPAEQPLSLESDWTVI 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00875 734 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 124 718 IPR045700 GO:0005096|GO:0043547
Pumo1g00875 734 Pfam Rab3 GTPase-activating protein catalytic subunit 404 555 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00875 Pumo-Chr1 13378055 13385884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00875 K18270 - gmx:100800515 1265.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00875 1 13378055 13385884 Pumo1g00875 1 13378055 13385884 ECH
Pumo1g00875 1 13378055 13385884 Pumo9g01880 9 47923954 47931456 PCT