Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00461 ATGAAGCAGCAACAGCAAAGTACTAGAGTGGAGTTTTTGGGCCTGGGCCTGGGCCTGTTGTTTGTGCTGATGGCATGTGGCACGGCTCGTGGTGCGGATGATTTGGCAAGCAAGTGTTCGGCGGTGATTCAGAAGGTAATTCCGTGTTTGGACTTCGCGACGGGGAAGGAAGCAACGCCGAAAAAGGAATGTTGCGACGCAGCTACGGCCATAAAGGAGAGCAACCCAGAGTGCTTGTGCTACATCATTCAAGAGACCCACAAGGGTAGCCCACAGGTTAAAAGCTTGGGTATTCAAGAGGCCAAGCTGCTTCAGCTCCCTTCTGTTTGCAACGTCAAAAACGCAAGCATCACCAACTGTCCTAAGCTTTTGGGTCTATCTCCAAGTTCCCCCGATGCTGCTATCTTCACAAATTCTTCCAAGTTAACTCCTTCTGCACCTGCAACAACAAACTCACAAACTGGGACCCCGCAGAGCCAAAACGGTTCGTATGGAAGTATGGTTAGACCTAGTACCGCTACCTATGTGATGGTGATGGCTTTGGCCATTGTTCTGGTTACAATTCCAACCGAATTTGTGAGCATTTATACATGA 594 0.4933 MKQQQQSTRVEFLGLGLGLLFVLMACGTARGADDLASKCSAVIQKVIPCLDFATGKEATPKKECCDAATAIKESNPECLCYIIQETHKGSPQVKSLGIQEAKLLQLPSVCNVKNASITNCPKLLGLSPSSPDAAIFTNSSKLTPSAPATTNSQTGTPQSQNGSYGSMVRPSTATYVMVMALAIVLVTIPTEFVSIYT 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00461 197 CDD AAI_LTSS 48 112 - -
Pumo1g00461 197 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 120 IPR036312 -
Pumo1g00461 197 Pfam Probable lipid transfer 31 120 IPR016140 -
Pumo1g00461 197 MobiDBLite consensus disorder prediction 141 165 - -
Pumo1g00461 197 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 22 170 IPR043325 -
Pumo1g00461 197 SMART aai_6 39 120 IPR016140 -
Pumo1g00461 197 Gene3D - 36 117 IPR036312 -
Pumo1g00461 197 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00461 Pumo-Chr1 6255085 6258059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00461 37 191 Acyl Lipid Metabolism Gene Families AT1G27950 49.682 3.92e-47 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00461 - - gmx:100499777 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00461 1 6255085 6258059 Pumo6g01220 6 16144396 16146946 PCT