Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01686 ATGATTCAACTCTCAAATCGAATCCTGGTCGTTTCTGTTTCTCCTCATAGGGGCGTGATGATGTCTGAGACAACTCGAAGCTTTTGCAAAGCCACTCCCTCCAATACCAACACACCCACTTCCATTGTTGAAGCCTCCCATTCCCAAGTTCGTGTCTTTGTGAGGAGAAACAAGAGACCCAGAAAAATGGCCGTCAAACTTGAAGAACACGACCATCTTCCATCCACCCAGGACCGCAAGGTTCCAGTTACACAGAAGTTTGGCCTACCAGAAATTGAAGAATTTGCGTATCGTGGAGCAAAGGAATCGACTCAGTGTGGGAAATCTGAAATGGACTCAGATGTGATTCCAGTGGCAAGTAAAGTTGATTCAACAAGATCTAGTGGTGAATCACCTGCCCACTGGGAAAAGGTGCTTGAGGGGATTCGCAAAATGAGGTGTTCTGCAGATGCACCAGTAGATACTATGGGATGTGAGAAAGCTGGTGATACATTACCTCCTAAGGAAAGAAGATTTGCTGTCCTGGTATCTTCTCTTTTATCAAGCCAAACAAAGGATCCTGTTACTCATGGAGCAATCCAACGTCTTCTTCAAAATGATCTGCTTACTGCTGATGCAATCAATAATGCTGATGAAGAAACCATCAAAAAGCTGATTTATCCTGTTGGGTTTTATACCAGAAAAGCTACTAACTTGAAAAAAATTGCAAATATTTGTCTCATGAAGTATGATGGAGACATACCTAGCTCAATTGAGCAACTACTGTTACTTCCTGGCATCGGTCCTAAGATGGCTCATTTGGTTATGAATGTTGGATGGAACAATGTTCAAGGGATTTGTGTAGATACTCATGTCCACCGCATTTGCAACCGGCTTGGGTGGGTCTCAAGATTGGGCACAAAACAGGTTCCTTTAAGTTTGTCAGCTTCACATTTTATGTATGGGGCATTATTACCTAATTTATTTATTTGTTCTTGCAACATCTTGGCGCTGGTGAAGTTGTAA 1005 0.4249 MIQLSNRILVVSVSPHRGVMMSETTRSFCKATPSNTNTPTSIVEASHSQVRVFVRRNKRPRKMAVKLEEHDHLPSTQDRKVPVTQKFGLPEIEEFAYRGAKESTQCGKSEMDSDVIPVASKVDSTRSSGESPAHWEKVLEGIRKMRCSADAPVDTMGCEKAGDTLPPKERRFAVLVSSLLSSQTKDPVTHGAIQRLLQNDLLTADAINNADEETIKKLIYPVGFYTRKATNLKKIANICLMKYDGDIPSSIEQLLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQVPLSLSASHFMYGALLPNLFICSCNILALVKL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01686 334 CDD ENDO3c 172 301 IPR003265 GO:0006284
Pumo11g01686 334 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 59 298 - -
Pumo11g01686 334 SUPERFAMILY DNA-glycosylase 143 298 IPR011257 GO:0003824|GO:0006281
Pumo11g01686 334 SMART endo3end 180 319 IPR003265 GO:0006284
Pumo11g01686 334 FunFam Endonuclease III-like protein 1 167 271 - -
Pumo11g01686 334 Gene3D - 270 318 IPR023170 -
Pumo11g01686 334 Gene3D Hypothetical protein; domain 2 158 269 - -
Pumo11g01686 334 Pfam HhH-GPD superfamily base excision DNA repair protein 176 298 IPR003265 GO:0006284
Pumo11g01686 334 ProSitePatterns Endonuclease III family signature. 245 274 IPR004036 -
Pumo11g01686 334 Pfam Helix-hairpin-helix motif 242 270 IPR000445 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01686 Pumo-Chr11 48517376 48520979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01686 K10773 - gmx:100818398 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04077 4 81491990 81494427 Pumo11g01686 11 48517376 48520979 PCT