Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01667 ATGGGTGGTGCTGGTGCACTTTTCTCAATGGCACTAGTAGTAATGACCCTAGTTACTCTAACACCCTCACCCGTTAATTCATGCCCTTCCTCCGAATGGGCAGCACTAATGGCCTTCAAAGCAGCCCTCAAAGAACCCTACCGTGGTTTCTTCCATTCATGGAGAGGCACTAACTGTTGCTACGGCTGGCACGGCATCACGTGCGACCCCACCACGCGCCGCGTCGCCGAAATCACCTTCCGCGGCGACGGAGCCGCCAACAACATCATCACCGGCCACATCTCCCCCTCCATCTGCAACCTCACGCAGCTCTCCAGCATCACCATCTCCGACTGGAAGGGCATTTCGGGAAACATCCCTCCCTGCATCACCACGCTCCCTCTCCTCCAAATCCTCGACCTCTCCGGCAACCTCATCCACGGCCAAATCCCCTCCGACATAGGGCGCCTCACGCAACTTACCCTGCTCAACCTCGCAGACAATCACATCTCGGGGAGAATCCCGAACTCCCTCGTGCACCTCTCCAACCTCATGCAATTGGACCTTCGCAACAACGCTATCGAAGGCCCAATTCCAATGGACATGGGCCGGCTTAAAAAACTCAACCGGGCCTTATTAAGCCACAATCTCATAACCGGCCGAATCCCAAGATCCATTTCCGAAATCTACGGGCTGGCGGACCTGGACCTATCGCTGAACCGGCTATCCGGTTCGATTCCCGCTTCGTTGGGCCGGATGGCGGTTCTGGACTCGCTGAACTTGAAGTACAACAACCTAACGGGGAATATTCCGTGGACGGTGTTGGGGTCGAGAATGAGCCATTTGGATGTGAGTAGAAACGCGTTGAGTGGGCGCATACCTAATGCGTTTGGAGAGGATTCGTATTTCATAAGCCTTGATTTGTCGTATAACAATTTGAGGGGTTCGGTTCCTAAGTCTATGGCGTTGGCCAATTACATTGGGTACTTGGACTTGAGTCATAACCGTCTCTGTGGGCTCATGCCACGTGGCGCGCCCTTCAACCACCTTCAACCGCTAAAGCCATGCTCTCGTGTCTCCGGGTCGCACACACTCGCTTGGGTTTCATCGTTCAGCAGCTAG 1101 0.5468 MGGAGALFSMALVVMTLVTLTPSPVNSCPSSEWAALMAFKAALKEPYRGFFHSWRGTNCCYGWHGITCDPTTRRVAEITFRGDGAANNIITGHISPSICNLTQLSSITISDWKGISGNIPPCITTLPLLQILDLSGNLIHGQIPSDIGRLTQLTLLNLADNHISGRIPNSLVHLSNLMQLDLRNNAIEGPIPMDMGRLKKLNRALLSHNLITGRIPRSISEIYGLADLDLSLNRLSGSIPASLGRMAVLDSLNLKYNNLTGNIPWTVLGSRMSHLDVSRNALSGRIPNAFGEDSYFISLDLSYNNLRGSVPKSMALANYIGYLDLSHNRLCGLMPRGAPFNHLQPLKPCSRVSGSHTLAWVSSFSS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01667 366 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 240 334 - -
Pumo11g01667 366 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Pumo11g01667 366 FunFam Nuclear pore complex protein NUP107 29 180 - -
Pumo11g01667 366 Gene3D Ribonuclease Inhibitor 25 86 IPR032675 -
Pumo11g01667 366 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 245 343 - -
Pumo11g01667 366 SUPERFAMILY L domain-like 27 335 - -
Pumo11g01667 366 Gene3D Ribonuclease Inhibitor 87 354 IPR032675 -
Pumo11g01667 366 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01667 Pumo-Chr11 48050663 48051921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01667 86 358 Receptor kinase-like Gene Family AT5G01890 29.969 9.01e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01667 - - gmx:100778852 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04047 4 81168733 81170810 Pumo11g01667 11 48050663 48051921 PCT