Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01537 ATGTCGGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGTGCTGGACGGTCTTTTGCTACATCATTTTCTGGTCAGTCTGGTGCAGCCTCCCCAATTTTTCATCACACTGGAGGTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCCGGTACACTCACATCAAGAAACTCAACTATAAATAATGTACCCTCGGGGGGTGTTCAACAACCCACTGGAAGCCTCTCTAGTGGAAGATTTACATCCAACAATCTCCCAGTTGCATTGTCTCAGCTATCTCATGGAAGCTCCCATGGACATTCAGGAGTCACCAATAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAGTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCTACATCTGCTGCAGTTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTAAACCCAATTTTGGGAAATGCAGGTCCTCGAATCACAAGTTCTGTGGGAAACATGGTTGGAGGAGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGCTCTTGCGTCTCGTCTAAATTTGGGTGCAAACAGTGGATCCGGTGGTTTAGGTATGCAAGGACAGAATCGATTGATGAGTGGTGTGCTTCCACAAGGATCTCCGCAGGTAATTTCAATGCTAGGAAATTCTTATCCTAGTGGGGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTGAGTAACTTGAACTCTATGGGGATGTTGAATGATGTGAATACCAATGACAATTCACCTTTTGACCTCAATGACTTCCCTCAACTGACAAGTCGTCCTAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGTGTTAGTCCCATTGTTCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGACAATGCTGTGCCAATGATGCAATCTCAGCATTTCTCTATGGGAAGGTCAGCTGGTTTCAGCTTAGGGGGTACATATTCATCACATCGAGCACAACAGCAACAGCATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCTGTTAACAACCAGGATCTTCTCCATTTACATGGATCAGATATTTTCCCATCTTCACATTCAACCTATCATTCACAGACCAGTGGACCTCCTGGCATTGGATTAAGGCCGTTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCGTATGATCAGCTCATCCAGCAATATCAACAGCACCAAAATCAGTCTCAGTTCCGCCTTCAAATGTCAGCTGTAAATCAGTCTTTTAGGGATCAGGGCATGAAGTCTATTCAAACTGCACAATCTGCACCAGATCCATTTGGTTTGCTTGGCCTGTTAAGTGTGATCAGGATGAGTGATCCTGACCTGACGTCTCTTGCTCTTGGAATTGATCTTACTACACTGGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGGTCTCCATGGTCTGATGAACCAGCTAAGGGCGATCCAGAGTTTACTGTGCCACAATGTTATTACGCCAAACAGCCACCTTCTCTACATCAAGGTTATTTTTCAAAGTTTTCGGTGGAAACATTGTTCTTCATATTTTACAGCATGCCCAAAGATGAAGCACAATTATATGCCGCCAATGAGCTTTACAACAGAGGTTGGTTTTATCACAAAGAACATCGTTTGTGGTTTATAAGAGTTCCCAACATGGAGCCGCTGGTTAAAACAAACACATACGAGAGAGGATCTTATCACTGTTTCGAACCAAGCATATTTGAAACCGTCCGCAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAAGAGACCACATCTGCCTCAACATTGA 1983 0.4322 MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPIFHHTGGIQGLHNIHGSFNVPNMPGTLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLSHGSSHGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSAAVGNRNAVPGLGVNPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPALASRLNLGANSGSGGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPSGGPLSQSHVQAVSNLNSMGMLNDVNTNDNSPFDLNDFPQLTSRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFTVPQCYYAKQPPSLHQGYFSKFSVETLFFIFYSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVPNMEPLVKTNTYERGSYHCFEPSIFETVRKDNFVLHYEMLEKRPHLPQH 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01537 660 PANTHER CCR4 NOT-RELATED 48 654 IPR040168 GO:0030015
Pumo11g01537 660 FunFam probable NOT transcription complex subunit VIP2 isoform X1 479 660 - -
Pumo11g01537 660 MobiDBLite consensus disorder prediction 261 294 - -
Pumo11g01537 660 Pfam NOT2 / NOT3 / NOT5 family 529 651 IPR007282 GO:0006355
Pumo11g01537 660 MobiDBLite consensus disorder prediction 261 299 - -
Pumo11g01537 660 Gene3D - 479 660 IPR038635 -
Pumo11g01537 660 MobiDBLite consensus disorder prediction 59 88 - -
Pumo11g01537 660 MobiDBLite consensus disorder prediction 413 441 - -
Pumo11g01537 660 MobiDBLite consensus disorder prediction 369 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01537 Pumo-Chr11 46444799 46453852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01537 K12605 - gmx:100807026 1233.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01537 11 46444799 46453852 Pumo11g01537 11 46444799 46453852 ECH
Pumo4g03935 4 79965727 79971992 Pumo11g01537 11 46444799 46453852 PCT